RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 CALM2P0DP24 149 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 CALM3P0DP25 149 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 EN2P19622 333 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 KIF5BP33176 963 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 MTFR1Q15390 333 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 TMEM67Q5HYA8 995 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 MAP3K21Q5TCX8 1036 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 CREB3L3Q68CJ9 461 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 SYNE3Q6ZMZ3 975 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 ZNF467Q7Z7K2 595 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 U2AF1L4Q8WU68 220 aaKnown RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 MPHOSPH6Q99547 160 aaKnown RBP9.17□□□□□ -0.94
PSEN1-222ENST00000557356 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.17□□□□□ -0.941e-9■■■■■ 54.1
PSEN1-222ENST00000557356 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 CCPG1Q9ULG6 757 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 CNPY2Q9Y2B0 182 aa9.17□□□□□ -0.94
PSEN1-222ENST00000557356 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 CCDC69A6NI79 296 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 ASB14A6NK59 587 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 COBLO75128 1261 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 ALAS1P13196 640 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 PSMA5P28066 241 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 SMARCA1P28370 1054 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 LIFRP42702 1097 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 GNAQP50148 359 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 CACNB2Q08289 660 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-222ENST00000557356 SEC23AQ15436 765 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 ZNF792Q3KQV3 632 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 MCF2L2Q86YR7 1114 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 ARRDC4Q8NCT1 418 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 NPLOC4Q8TAT6 608 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 MAML3Q96JK9 1138 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 DEFB118Q96PH6 123 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 NEK1Q96PY6 1258 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 LZTS2Q9BRK4 669 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 HTATIP2Q9BUP3 242 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
PSEN1-222ENST00000557356 MGAMO43451 1857 aa9.16□□□□□ -0.94
PSEN1-222ENST00000557356 FRMPD2Q68DX3 1309 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 SYNGAP1Q96PV0 1343 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 DNAJC25-GNG10A0A024R161 153 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 KLRF2D3W0D1 207 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 PRC1O43663 620 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 DHX16O60231 1041 aaKnown RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CNGA1P29973 690 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 SLC16A2P36021 539 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CCL14Q16627 93 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 TTBK2Q6IQ55 1244 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CCDC174Q6PII3 467 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 MAMDC4Q6UXC1 1216 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 MB21D2Q8IYB1 491 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 RGS22Q8NE09 1264 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CTCFLQ8NI51 663 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 IGDCC4Q8TDY8 1250 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 TINF2Q9BSI4 451 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 CRISPLD2Q9H0B8 497 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 RNF146Q9NTX7 359 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 MAP3K20Q9NYL2 800 aaKnown RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 ADD3Q9UEY8 706 aaKnown RBP9.15□□□□□ -0.94
PSEN1-222ENST00000557356 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
PSEN1-222ENST00000557356 MYH4Q9Y623 1939 aa9.15□□□□□ -0.95
PSEN1-222ENST00000557356 ZNF536O15090 1300 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-222ENST00000557356 SEPT4O43236 478 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 DDAH1O94760 285 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 FARP2O94887 1054 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-222ENST00000557356 IGHA2P01877 340 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 PGK2P07205 417 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 CYP2C19P33261 490 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 FGD1P98174 961 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 PPP2R5BQ15173 497 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 ADGRF4Q8IZF3 695 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 CHMP4CQ96CF2 233 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 AMNQ9BXJ7 453 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 UBA5Q9GZZ9 404 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 ABHD16BQ9H3Z7 469 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 HOMER2Q9NSB8 354 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 DDX20Q9UHI6 824 aaKnown RBP9.14□□□□□ -0.95
PSEN1-222ENST00000557356 OGDHLQ9ULD0 1010 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 MRPL11Q9Y3B7 192 aaKnown RBP9.14□□□□□ -0.95
PSEN1-222ENST00000557356 SLC12A7Q9Y666 1083 aa9.14□□□□□ -0.95
PSEN1-222ENST00000557356 ABCB11O95342 1321 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 GOLGA8HP0CJ92 632 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 CYBAP13498 195 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 HSPA4P34932 840 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 TROAPQ12815 778 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 GRM4Q14833 912 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
PSEN1-222ENST00000557356 FBXO11Q86XK2 927 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms