RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 SMG9Q9H0W8 520 aaKnown RBP6.25□□□□□ -1.41
ATXN3-247ENST00000557311 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 STARD13Q9Y3M8 1113 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 XDHP47989 1333 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
ATXN3-247ENST00000557311 A0A0U1RQG5 324 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 FAM229AH3BQW9 127 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 H3BRB1 525 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 RIPK4P57078 832 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 CRHR2Q13324 411 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 GDF6Q6KF10 455 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 PHLDB3Q6NSJ2 640 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 ZBED3Q96IU2 234 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 DEFB129Q9H1M3 183 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 SEMA6BQ9H3T3 888 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 TUT1Q9H6E5 874 aaKnown RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 HYPKQ9NX55 129 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 DBF4Q9UBU7 674 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-247ENST00000557311 POLIQ9UNA4 740 aa6.24□□□□□ -1.41
ATXN3-247ENST00000557311 DUOX1Q9NRD9 1551 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 ZBTB42B2RXF5 422 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 CHL1O00533 1208 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 PDE8AO60658 829 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 SASH1O94885 1247 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 HOXB7P09629 217 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
ATXN3-247ENST00000557311 SERPINB4P48594 390 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 NRLP54845 237 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 RAC1P63000 192 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 GPLD1P80108 840 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 HYAL2Q12891 473 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 PERM1Q5SV97 790 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 NCAPG2Q86XI2 1143 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 DMRTC2Q8IXT2 367 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-247ENST00000557311 CCER1Q8TC90 406 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-247ENST00000557311 DPF3Q92784 378 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 ELP3Q9H9T3 547 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-247ENST00000557311 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 NAGPAQ9UK23 515 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ATXN3-247ENST00000557311 A6NHS1 94 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 USP2O75604 605 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PDGFAP04085 211 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 MZF1P28698 734 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 WFDC8Q8IUA0 241 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 DHX37Q8IY37 1157 aaKnown RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 CCDC191Q8NCU4 936 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PLD4Q96BZ4 506 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PSMG3-AS1Q96PY0 264 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PTPN18Q99952 460 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 ZFYVE28Q9HCC9 887 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 BIN2Q9UBW5 565 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-247ENST00000557311 BRPF3Q9ULD4 1205 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 FZD1Q9UP38 647 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 LEMD3Q9Y2U8 911 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
ATXN3-247ENST00000557311 MED23Q9ULK4 1368 aa6.21□□□□□ -1.41
ATXN3-247ENST00000557311 NUP98P52948 1817 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 MYO1BO43795 1136 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 CES1P23141 567 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
ATXN3-247ENST00000557311 PRMT2P55345 433 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 CAP1Q01518 475 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 KRT24Q2M2I5 525 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 FOXD4L6Q3SYB3 417 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-247ENST00000557311 FOXD4L3Q6VB84 417 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-247ENST00000557311 MDFIQ99750 246 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 CWC25Q9NXE8 425 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-247ENST00000557311 TMEM63CQ9P1W3 806 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 KANSL3Q9P2N6 904 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.42
ATXN3-247ENST00000557311 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 SPATA31C1P0DKV0 1188 aa6.2□□□□□ -1.42
ATXN3-247ENST00000557311 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms