RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 PPIGQ13427 754 aaKnown RBP eCLIP12.08□□□□□ -0.48
RDH11-209ENST00000557273 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
RDH11-209ENST00000557273 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
RDH11-209ENST00000557273 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
RDH11-209ENST00000557273 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
RDH11-209ENST00000557273 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
RDH11-209ENST00000557273 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
RDH11-209ENST00000557273 ARVCFO00192 962 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 CTAGE5O15320 804 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 RNF113AO15541 343 aaKnown RBP12.07□□□□□ -0.48
RDH11-209ENST00000557273 GPAA1O43292 621 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 TTLL1O95922 423 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 C6orf222P0C671 652 aaPredicted RBP12.07□□□□□ -0.48
RDH11-209ENST00000557273 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 CCDC144BQ3MJ40 725 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 FAM126BQ8IXS8 530 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 MIER1Q8N108 512 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 CPXCR1Q8N123 301 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 ANKRD35Q8N283 1001 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 FAM133AQ8N9E0 248 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 GBF1Q92538 1859 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.07□□□□□ -0.487e-9■■□□□ 11.4
RDH11-209ENST00000557273 ZNF576Q9H609 170 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 RAVER2Q9HCJ3 691 aaKnown RBP12.07□□□□□ -0.48
RDH11-209ENST00000557273 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 LCTP09848 1927 aa12.07□□□□□ -0.48
RDH11-209ENST00000557273 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 PLA2G6O60733 806 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 CD4P01730 458 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 BMP3P12645 472 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 TMEM240Q5SV17 173 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 PSRC1Q6PGN9 363 aaPredicted RBP12.06□□□□□ -0.48
RDH11-209ENST00000557273 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 CCDC144CPQ8IYA2 1237 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
RDH11-209ENST00000557273 SLC43A3Q8NBI5 491 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 NEDD1Q8NHV4 660 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 KIFC2Q96AC6 838 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 TIFAQ96CG3 184 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 GPATCH3Q96I76 525 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 SEZ6LQ9BYH1 1024 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
RDH11-209ENST00000557273 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
RDH11-209ENST00000557273 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
RDH11-209ENST00000557273 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
RDH11-209ENST00000557273 CABYRO75952 493 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 TDO2P48775 406 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
RDH11-209ENST00000557273 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 FAM160B2Q86V87 743 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 TMEM199Q8N511 208 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 BCL11AQ9H165 835 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 ACAD9Q9H845 621 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 GNEQ9Y223 722 aaKnown RBP12.05□□□□□ -0.48
RDH11-209ENST00000557273 ZNF536O15090 1300 aa12.05□□□□□ -0.48
RDH11-209ENST00000557273 ASB14A6NK59 587 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
RDH11-209ENST00000557273 PRDM1O75626 825 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 CSF2RAP15509 400 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 STAT2P52630 851 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
RDH11-209ENST00000557273 PDE4BQ07343 736 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
RDH11-209ENST00000557273 USP38Q8NB14 1042 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 HERVK_113Q902F9 699 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 A1CFQ9NQ94 594 aaKnown RBP12.04□□□□□ -0.48
RDH11-209ENST00000557273 RCAN3Q9UKA8 241 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 ASTN1O14525 1302 aa12.04□□□□□ -0.48
RDH11-209ENST00000557273 M0R2C6 588 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 NACAP1Q9BZK3 213 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 IL23AQ9NPF7 189 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 Q9Y3F1 56 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 TTC41PQ6P2S7 1318 aa12.03□□□□□ -0.48
RDH11-209ENST00000557273 SCN10AQ9Y5Y9 1956 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 SLC3A2P08195 630 aaKnown RBP12.02□□□□□ -0.49
RDH11-209ENST00000557273 SLC1A4P43007 532 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 NOVP48745 357 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 TNFAIP2Q03169 654 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 RAB30Q15771 203 aa12.02□□□□□ -0.49
RDH11-209ENST00000557273 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms