RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 KLHL30Q0D2K2 578 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 DCAF4Q8WV16 495 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
NEK9-210ENST00000557026 MED7O43513 233 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 LMNB1P20700 586 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PRKG1Q13976 671 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 FAM102BQ5T8I3 360 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 ARMCX3Q9UH62 379 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PALLDQ8WX93 1383 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 XPAP23025 273 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 PSMC4P43686 418 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 RASA3Q14644 834 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 G2E3Q7L622 706 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 RAB20Q9NX57 234 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 JAG2Q9Y219 1238 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 KDM6BO15054 1643 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PSAPP07602 524 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 SECISBP2LQ93073 1101 aaKnown RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
NEK9-210ENST00000557026 CIB2O75838 187 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 STAM2O75886 525 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 RNF8O76064 485 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
NEK9-210ENST00000557026 PTGS1P23219 599 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 CIITAP33076 1130 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.3
NEK9-210ENST00000557026 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 PFKFB2O60825 505 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 JAK3P52333 1124 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 RCAN1P53805 252 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
NEK9-210ENST00000557026 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 MAGEA1P43355 309 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 PDE6CP51160 858 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 ASPHQ12797 758 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 FASTKD5Q7L8L6 764 aaKnown RBP13.15□□□□□ -0.3
NEK9-210ENST00000557026 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.15□□□□□ -0.3
NEK9-210ENST00000557026 ACCSQ96QU6 501 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
NEK9-210ENST00000557026 CDK12Q9NYV4 1490 aaPredicted RBP13.15□□□□□ -0.3
NEK9-210ENST00000557026 ABCC12Q96J65 1359 aa13.15□□□□□ -0.31
NEK9-210ENST00000557026 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 TPD52P55327 224 aaPredicted RBP13.14□□□□□ -0.31
NEK9-210ENST00000557026 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KIAA1841Q6NSI8 718 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 SPON1Q9HCB6 807 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 TNKSO95271 1327 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 PRDM1O75626 825 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 LDHAP00338 332 aaKnown RBP13.14□□□□□ -0.31
NEK9-210ENST00000557026 ELF1P32519 619 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 STAT2P52630 851 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 MFAP3P55082 362 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEK9-210ENST00000557026 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 KPNA2P52292 529 aaKnown RBP13.14□□□□□ -0.31
NEK9-210ENST00000557026 MAP3K21Q5TCX8 1036 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 ADALQ6DHV7 355 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
NEK9-210ENST00000557026 TRIM62Q9BVG3 475 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 K7ENM7 598 aa13.14□□□□□ -0.31
NEK9-210ENST00000557026 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms