RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 CPXCR1Q8N123 301 aa20.34■□□□□ 0.85
PSEN1-218ENST00000556864 MOV10L1Q9BXT6 1211 aaKnown RBP20.34■□□□□ 0.85
PSEN1-218ENST00000556864 MROH8Q9H579 483 aa20.34■□□□□ 0.85
PSEN1-218ENST00000556864 RAVER2Q9HCJ3 691 aaKnown RBP20.34■□□□□ 0.85
PSEN1-218ENST00000556864 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
PSEN1-218ENST00000556864 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-218ENST00000556864 PLEKHA8P1O95397 391 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 FMNL1O95466 1100 aaPredicted RBP20.33■□□□□ 0.85
PSEN1-218ENST00000556864 ICAM1P05362 532 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 PSMC4P43686 418 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 WDR78Q5VTH9 848 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 NCAPG2Q86XI2 1143 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 COA7Q96BR5 231 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 CPVLQ9H3G5 476 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 SEC63Q9UGP8 760 aaKnown RBP20.33■□□□□ 0.85
PSEN1-218ENST00000556864 FBXO40Q9UH90 709 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 IVNS1ABPQ9Y6Y0 642 aa20.33■□□□□ 0.85
PSEN1-218ENST00000556864 PEX10O60683 326 aa20.32■□□□□ 0.84
PSEN1-218ENST00000556864 HOXD10P28358 340 aa20.32■□□□□ 0.84
PSEN1-218ENST00000556864 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
PSEN1-218ENST00000556864 CPLX2Q6PUV4 134 aaKnown RBP20.32■□□□□ 0.84
PSEN1-218ENST00000556864 SOCS4Q8WXH5 440 aa20.32■□□□□ 0.84
PSEN1-218ENST00000556864 RRP36Q96EU6 259 aaKnown RBP20.32■□□□□ 0.84
PSEN1-218ENST00000556864 RIOX1Q9H6W3 641 aa20.32■□□□□ 0.84
PSEN1-218ENST00000556864 ZNF236Q9UL36 1845 aa20.32■□□□□ 0.84
PSEN1-218ENST00000556864 ZBTB5O15062 677 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 ERCC3P19447 782 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 PRMT2P55345 433 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 SNAP25P60880 206 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 QRICH1Q2TAL8 776 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 Q3C1V9 767 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 PLEKHH3Q7Z736 793 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 HOMER1Q86YM7 354 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 CHST13Q8NET6 341 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 PORCNQ9H237 461 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 SLKQ9H2G2 1235 aaPredicted RBP20.31■□□□□ 0.84
PSEN1-218ENST00000556864 EFCC1Q9HA90 598 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 VAT1LQ9HCJ6 419 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 HPS5Q9UPZ3 1129 aa20.31■□□□□ 0.84
PSEN1-218ENST00000556864 ZNF536O15090 1300 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 ABCB11O95342 1321 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 CPLX1O14810 134 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 SLC4A3P48751 1232 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
PSEN1-218ENST00000556864 GPR142Q7Z601 462 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 CTU1Q7Z7A3 348 aaKnown RBP20.3■□□□□ 0.84
PSEN1-218ENST00000556864 FBXO11Q86XK2 927 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
PSEN1-218ENST00000556864 MTMR8Q96EF0 704 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 AMNQ9BXJ7 453 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 ARHGAP39Q9C0H5 1083 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 RNF146Q9NTX7 359 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
PSEN1-218ENST00000556864 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
PSEN1-218ENST00000556864 CYTH3O43739 400 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 CDKL5O76039 1030 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 ALAS1P13196 640 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 MCM2P49736 904 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 STK3Q13188 491 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 AGBL1Q96MI9 1066 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 PIGSQ96S52 555 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 TRIM17Q9Y577 477 aa20.29■□□□□ 0.84
PSEN1-218ENST00000556864 MGAMO43451 1857 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 SLC15A5A6NIM6 579 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 STRNO43815 780 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 PFKFB2O60825 505 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 ECM2O94769 699 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-218ENST00000556864 CDC27P30260 824 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 KCTD2Q14681 263 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 USH1GQ495M9 461 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 ABRAQ8N0Z2 381 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 ZSCAN31Q96LW9 406 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-218ENST00000556864 LARP6Q9BRS8 491 aaKnown RBP20.28■□□□□ 0.84
PSEN1-218ENST00000556864 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
PSEN1-218ENST00000556864 RBBP6Q7Z6E9 1792 aaKnown RBP20.28■□□□□ 0.84
PSEN1-218ENST00000556864 PLXNB2O15031 1838 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 FCER1AP12319 257 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 OTOP1Q7RTM1 612 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 MMP19Q99542 508 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 NCOA5Q9HCD5 579 aaKnown RBP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 SH2B1Q9NRF2 756 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 FAM217BQ9NTX9 383 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-218ENST00000556864 SRRDQ9UH36 339 aa20.27■□□□□ 0.84
PSEN1-218ENST00000556864 PFASO15067 1338 aa20.27■□□□□ 0.83
PSEN1-218ENST00000556864 hCG_1984214I3L0E3 225 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms