RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 HOXC6P09630 235 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 PDHBP11177 359 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 CAPN2P17655 700 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 ANKRD35Q8N283 1001 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
SLIRP-207ENST00000556831 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
SLIRP-207ENST00000556831 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
SLIRP-207ENST00000556831 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-207ENST00000556831 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-207ENST00000556831 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 WTAPQ15007 396 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 TKFCQ3LXA3 575 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
SLIRP-207ENST00000556831 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 PAK6Q9NQU5 681 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-207ENST00000556831 CCPG1Q9ULG6 757 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 SMCHD1A6NHR9 2005 aa16.48■□□□□ 0.23
SLIRP-207ENST00000556831 H0YGN5 161 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
SLIRP-207ENST00000556831 PARP1P09874 1014 aaKnown RBP16.47■□□□□ 0.23
SLIRP-207ENST00000556831 SLC16A2P36021 539 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 GJA8P48165 433 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 COL9A3Q14050 684 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-207ENST00000556831 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 TTBK2Q6IQ55 1244 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 TRPV1Q8NER1 839 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 FRMPD3Q5JV73 1810 aa16.47■□□□□ 0.23
SLIRP-207ENST00000556831 SLC27A2O14975 620 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 REC8O95072 547 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 IGHA2P01877 340 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 PGK2P07205 417 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 ALAS1P13196 640 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 CNGA1P29973 690 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 CYP2C19P33261 490 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 MCM5P33992 734 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 UBE2Q1Q7Z7E8 422 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
SLIRP-207ENST00000556831 RNF146Q9NTX7 359 aa16.46■□□□□ 0.23
SLIRP-207ENST00000556831 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
SLIRP-207ENST00000556831 PLXNA1Q9UIW2 1896 aa16.46■□□□□ 0.22
SLIRP-207ENST00000556831 A0A1W2PPC1 479 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 SGPL1O95470 568 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 ICAM1P05362 532 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 GOLGA8HP0CJ92 632 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 STOX1Q6ZVD7 989 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 MAML3Q96JK9 1138 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 RANBP17Q9H2T7 1088 aaKnown RBP16.45■□□□□ 0.22
SLIRP-207ENST00000556831 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 ALPK3Q96L96 1907 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 PFASO15067 1338 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 ZNF536O15090 1300 aa16.45■□□□□ 0.22
SLIRP-207ENST00000556831 MSCO60682 206 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 PLA2G5P39877 138 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 KRT32Q14532 448 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 PRAMEF19Q5SWL8 479 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 CNPY2Q9Y2B0 182 aa16.44■□□□□ 0.22
SLIRP-207ENST00000556831 DIS3Q9Y2L1 958 aaKnown RBP16.44■□□□□ 0.22
SLIRP-207ENST00000556831 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 POTEB2H3BUK9 544 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 PRC1O43663 620 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
SLIRP-207ENST00000556831 COL9A1P20849 921 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 SEC23AQ15436 765 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 MB21D2Q8IYB1 491 aaPredicted RBP16.43■□□□□ 0.22
SLIRP-207ENST00000556831 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
SLIRP-207ENST00000556831 LCTP09848 1927 aa16.43■□□□□ 0.22
SLIRP-207ENST00000556831 LHX8Q68G74 356 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 NSMFQ6X4W1 530 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 FGD4Q96M96 766 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 MTA3Q9BTC8 594 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 SENP2Q9HC62 589 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 STXBP5LQ9Y2K9 1186 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
SLIRP-207ENST00000556831 KIF5BP33176 963 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms