RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 KCTD2Q14681 263 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 CCDC96Q2M329 555 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 PDE4DIPQ5VU43 2346 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 MFSD14CQ5VZR4 134 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 MAML3Q96JK9 1138 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 SLC5A4Q9NY91 659 aa26.35■■□□□ 1.81
PABPN1-206ENST00000556809 CTDP1Q9Y5B0 961 aaPredicted RBP26.35■■□□□ 1.81
PABPN1-206ENST00000556809 CYP2C19P33261 490 aa26.34■■□□□ 1.81
PABPN1-206ENST00000556809 ANTXR2P58335 489 aa26.34■■□□□ 1.81
PABPN1-206ENST00000556809 ZNF543Q08ER8 600 aa26.34■■□□□ 1.81
PABPN1-206ENST00000556809 ZNF792Q3KQV3 632 aa26.34■■□□□ 1.81
PABPN1-206ENST00000556809 FRMPD2Q68DX3 1309 aaPredicted RBP26.34■■□□□ 1.81
PABPN1-206ENST00000556809 SMCHD1A6NHR9 2005 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 PGK2P07205 417 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 SEC23AQ15436 765 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 C8orf34Q49A92 452 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 CHST3Q7LGC8 479 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 CHST13Q8NET6 341 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 AGBL1Q96MI9 1066 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 RANBP17Q9H2T7 1088 aaKnown RBP26.33■■□□□ 1.81
PABPN1-206ENST00000556809 DIS3Q9Y2L1 958 aaKnown RBP26.33■■□□□ 1.81
PABPN1-206ENST00000556809 SNX14Q9Y5W7 946 aa26.33■■□□□ 1.81
PABPN1-206ENST00000556809 FRMPD3Q5JV73 1810 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 DNAJC25-GNG10A0A024R161 153 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 IFIT3O14879 490 aaKnown RBP26.32■■□□□ 1.8
PABPN1-206ENST00000556809 TFRCP02786 760 aaKnown RBP26.32■■□□□ 1.8
PABPN1-206ENST00000556809 MCM5P33992 734 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 SLC16A2P36021 539 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 SART3Q15020 963 aaKnown RBP26.32■■□□□ 1.8
PABPN1-206ENST00000556809 ADCK5Q3MIX3 580 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 LHX8Q68G74 356 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 PNMA1Q8ND90 353 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 TRPV1Q8NER1 839 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 NEK1Q96PY6 1258 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 KAT14Q9H8E8 782 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 GPCPD1Q9NPB8 672 aa26.32■■□□□ 1.8
PABPN1-206ENST00000556809 ERICH2A1L162 156 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 PRC1O43663 620 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 CYBAP13498 195 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 SNAP25P60880 206 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 COL9A3Q14050 684 aaPredicted RBP26.31■■□□□ 1.8
PABPN1-206ENST00000556809 IFIT1BQ5T764 474 aaKnown RBP26.31■■□□□ 1.8
PABPN1-206ENST00000556809 SYDE2Q5VT97 1194 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 FBXO40Q9UH90 709 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 OGDHLQ9ULD0 1010 aa26.31■■□□□ 1.8
PABPN1-206ENST00000556809 SLC4A3P48751 1232 aa26.3■■□□□ 1.8
PABPN1-206ENST00000556809 MTA3Q9BTC8 594 aa26.3■■□□□ 1.8
PABPN1-206ENST00000556809 SEC24BO95487 1268 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 MNX1P50219 401 aaPredicted RBP26.29■■□□□ 1.8
PABPN1-206ENST00000556809 WTAPQ15007 396 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 TKFCQ3LXA3 575 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 TMEM67Q5HYA8 995 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 GPATCH4Q5T3I0 446 aaKnown RBP26.29■■□□□ 1.8
PABPN1-206ENST00000556809 CCDC174Q6PII3 467 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 ANKLE1Q8NAG6 615 aa26.29■■□□□ 1.8
PABPN1-206ENST00000556809 FARP2O94887 1054 aaPredicted RBP26.28■■□□□ 1.8
PABPN1-206ENST00000556809 ICAM1P05362 532 aa26.28■■□□□ 1.8
PABPN1-206ENST00000556809 IGDCC4Q8TDY8 1250 aa26.28■■□□□ 1.8
PABPN1-206ENST00000556809 TMEM87BQ96K49 555 aa26.28■■□□□ 1.8
PABPN1-206ENST00000556809 TINF2Q9BSI4 451 aa26.28■■□□□ 1.8
PABPN1-206ENST00000556809 ACAD9Q9H845 621 aa26.28■■□□□ 1.8
PABPN1-206ENST00000556809 HMGB1P09429 215 aaKnown RBP26.27■■□□□ 1.8
PABPN1-206ENST00000556809 GOLGA8HP0CJ92 632 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 DHX32Q7L7V1 743 aaKnown RBP26.27■■□□□ 1.8
PABPN1-206ENST00000556809 DDX11Q96FC9 970 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 JAKMIP1Q96N16 626 aaKnown RBP26.27■■□□□ 1.8
PABPN1-206ENST00000556809 TRERF1Q96PN7 1200 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 HOMER2Q9NSB8 354 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 RNF146Q9NTX7 359 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 WDR19Q8NEZ3 1342 aa26.27■■□□□ 1.8
PABPN1-206ENST00000556809 ANKRD35Q8N283 1001 aa26.26■■□□□ 1.79
PABPN1-206ENST00000556809 FGD4Q96M96 766 aa26.26■■□□□ 1.79
PABPN1-206ENST00000556809 SENP2Q9HC62 589 aa26.26■■□□□ 1.79
PABPN1-206ENST00000556809 SH2B2O14492 632 aaPredicted RBP26.25■■□□□ 1.79
PABPN1-206ENST00000556809 ALAS1P13196 640 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 PRAMEF19Q5SWL8 479 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 MAMDC4Q6UXC1 1216 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 MSL3Q8N5Y2 521 aaKnown RBP26.25■■□□□ 1.79
PABPN1-206ENST00000556809 CPVLQ9H3G5 476 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 LY9Q9HBG7 655 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 A1CFQ9NQ94 594 aaKnown RBP26.25■■□□□ 1.79
PABPN1-206ENST00000556809 GPHNQ9NQX3 736 aaPredicted RBP26.25■■□□□ 1.79
PABPN1-206ENST00000556809 DDX20Q9UHI6 824 aaKnown RBP26.25■■□□□ 1.79
PABPN1-206ENST00000556809 NRBP1Q9UHY1 535 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 CCPG1Q9ULG6 757 aa26.25■■□□□ 1.79
PABPN1-206ENST00000556809 TAL1P17542 331 aaPredicted RBP26.24■■□□□ 1.79
PABPN1-206ENST00000556809 PSMA5P28066 241 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 EXOSC10Q01780 885 aaKnown RBP26.24■■□□□ 1.79
PABPN1-206ENST00000556809 ASPRV1Q53RT3 343 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 MUM1L1Q5H9M0 696 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 ZNF467Q7Z7K2 595 aaPredicted RBP26.24■■□□□ 1.79
PABPN1-206ENST00000556809 DIS3LQ8TF46 1054 aaKnown RBP26.24■■□□□ 1.79
PABPN1-206ENST00000556809 PAWRQ96IZ0 340 aaKnown RBP26.24■■□□□ 1.79
PABPN1-206ENST00000556809 LRRC2Q9BYS8 371 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 UBA5Q9GZZ9 404 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 LCTP09848 1927 aa26.24■■□□□ 1.79
PABPN1-206ENST00000556809 MSCO60682 206 aa26.23■■□□□ 1.79
PABPN1-206ENST00000556809 BLOC1S2Q6QNY1 142 aa26.23■■□□□ 1.79
PABPN1-206ENST00000556809 FAM133AQ8N9E0 248 aa26.23■■□□□ 1.79
PABPN1-206ENST00000556809 TCEANC2Q96MN5 208 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms