RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
XRCC3-216ENST00000556682 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 PFASO15067 1338 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 RAD50Q92878 1312 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 AKR1A1P14550 325 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 MAMDC4Q6UXC1 1216 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 BTNL9Q6UXG8 535 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 KRT23Q9C075 422 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
XRCC3-216ENST00000556682 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 KDM4AO75164 1064 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 ALAS1P13196 640 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
XRCC3-216ENST00000556682 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
XRCC3-216ENST00000556682 GJC2Q5T442 439 aaPredicted RBP12.68□□□□□ -0.38
XRCC3-216ENST00000556682 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 RNF180Q86T96 592 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 CCPG1Q9ULG6 757 aa12.68□□□□□ -0.38
XRCC3-216ENST00000556682 NEDD4P46934 1319 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 ICAM1P05362 532 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 ZNF865P0CJ78 1059 aaPredicted RBP12.67□□□□□ -0.38
XRCC3-216ENST00000556682 PDHBP11177 359 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 TRDNQ13061 729 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 UBAC1Q9BSL1 405 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
XRCC3-216ENST00000556682 PRKAG2Q9UGJ0 569 aa12.67□□□□□ -0.38
XRCC3-216ENST00000556682 ZMYND8Q9ULU4 1186 aaPredicted RBP12.67□□□□□ -0.38
XRCC3-216ENST00000556682 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ZNF536O15090 1300 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ASB14A6NK59 587 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 B4E1Z4 1266 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 SNAI1O95863 264 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 TAL1P17542 331 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 CHMLP26374 656 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 SLC16A2P36021 539 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ZNF543Q08ER8 600 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ACVR2BQ13705 512 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 LRRC41Q15345 812 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
XRCC3-216ENST00000556682 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-216ENST00000556682 FRMPD2Q68DX3 1309 aaPredicted RBP12.65□□□□□ -0.38
XRCC3-216ENST00000556682 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 SNHG28P0DPA3 235 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 SNAP25P60880 206 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 FAM133AQ8N9E0 248 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
XRCC3-216ENST00000556682 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 SYN1P17600 705 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 BMP8BP34820 402 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
XRCC3-216ENST00000556682 ADD3Q9UEY8 706 aaKnown RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-216ENST00000556682 ERICH2A1L162 156 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 SGSM2O43147 1006 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 PGK1P00558 417 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
XRCC3-216ENST00000556682 FXR1P51114 621 aaKnown RBP eCLIP12.63□□□□□ -0.39
XRCC3-216ENST00000556682 RTP1P59025 263 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
XRCC3-216ENST00000556682 IFIT1BQ5T764 474 aaKnown RBP12.63□□□□□ -0.39
XRCC3-216ENST00000556682 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
XRCC3-216ENST00000556682 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
XRCC3-216ENST00000556682 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms