RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 BIN2Q9UBW5 565 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-239ENST00000556315 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
ATXN3-239ENST00000556315 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-239ENST00000556315 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
ATXN3-239ENST00000556315 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ATXN3-239ENST00000556315 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 OR13H1Q8NG92 308 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
ATXN3-239ENST00000556315 MUC3BQ9H195 1237 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 TRIM33Q9UPN9 1127 aa6.31□□□□□ -1.4
ATXN3-239ENST00000556315 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 FSTP19883 344 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 NF2P35240 595 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 EIF1AXP47813 144 aaKnown RBP6.3□□□□□ -1.4
ATXN3-239ENST00000556315 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
ATXN3-239ENST00000556315 AAMPQ13685 434 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 TMCO4Q5TGY1 634 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 GMLQ99445 158 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 PODXL2Q9NZ53 605 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 BCORQ6W2J9 1755 aa6.3□□□□□ -1.4
ATXN3-239ENST00000556315 TM4SF5O14894 197 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 ZAP70P43403 619 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 MMP14P50281 582 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PROSER3Q2NL68 480 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 LDLRAD1Q5T700 205 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PIK3R5Q8WYR1 880 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PNNQ9H307 717 aaKnown RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 BABAM1Q9NWV8 329 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 PPME1Q9Y570 386 aa6.29□□□□□ -1.4
ATXN3-239ENST00000556315 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-239ENST00000556315 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-239ENST00000556315 UFL1O94874 794 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 ANXA1P04083 346 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 RPLP1P05386 114 aaKnown RBP6.28□□□□□ -1.4
ATXN3-239ENST00000556315 PCSK2P16519 638 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 NFE2L2Q16236 605 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 NBPF9Q3BBW0 867 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 KRTAP1-3Q8IUG1 177 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 ERO1AQ96HE7 468 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 ISCA1Q9BUE6 129 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
ATXN3-239ENST00000556315 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 WNT10BO00744 389 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 IRS4O14654 1257 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-239ENST00000556315 ZBTB39O15060 712 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 NDUFB5O43674 189 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 KIF4AO95239 1232 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 ARHGAP4P98171 946 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 HYAL2Q12891 473 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 ECM1Q16610 540 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 CCDC27Q2M243 656 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 OTUD7BQ6GQQ9 843 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 AGGF1Q8N302 714 aaeCLIP6.27□□□□□ -1.41
ATXN3-239ENST00000556315 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 UBL7Q96S82 380 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-239ENST00000556315 PLEKHF1Q96S99 279 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 BRPF3Q9ULD4 1205 aa6.27□□□□□ -1.41
ATXN3-239ENST00000556315 SCAF8Q9UPN6 1271 aaKnown RBP6.27□□□□□ -1.41
ATXN3-239ENST00000556315 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 ZNF609O15014 1411 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 H0YGN5 161 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 LINC01387J3KSC0 135 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 USP5P45974 858 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 SP3Q02447 781 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 PRKG1Q13976 671 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 APOBEC3FQ8IUX4 373 aaKnown RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 SLC17A8Q8NDX2 589 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 ZNF428Q96B54 188 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 DCTN4Q9UJW0 460 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 ANGEL1Q9UNK9 670 aaKnown RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 FNDC3AQ9Y2H6 1198 aaKnown RBP6.26□□□□□ -1.41
ATXN3-239ENST00000556315 RAXQ9Y2V3 346 aa6.26□□□□□ -1.41
ATXN3-239ENST00000556315 MYO3BQ8WXR4 1341 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 WISP1O95388 367 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms