RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 FGD4Q96M96 766 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 LMCD1Q9NZU5 365 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
ABCD4-224ENST00000556119 ZFHX2Q9C0A1 2572 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-224ENST00000556119 DCXO43602 365 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 ST18O60284 1047 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 CABYRO75952 493 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 PFKMP08237 780 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 HERC6Q8IVU3 1022 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 MAGEB6Q8N7X4 407 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 ZNF512BQ96KM6 892 aaPredicted RBP16.09■□□□□ 0.17
ABCD4-224ENST00000556119 SLC9A7Q96T83 725 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
ABCD4-224ENST00000556119 DCHS1Q96JQ0 3298 aa16.08■□□□□ 0.17
ABCD4-224ENST00000556119 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.08■□□□□ 0.16
ABCD4-224ENST00000556119 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
ABCD4-224ENST00000556119 KCNA5P22460 613 aa16.08■□□□□ 0.16
ABCD4-224ENST00000556119 ICA1Q05084 483 aa16.08■□□□□ 0.16
ABCD4-224ENST00000556119 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
ABCD4-224ENST00000556119 RIOK1Q9BRS2 568 aaKnown RBP16.08■□□□□ 0.16
ABCD4-224ENST00000556119 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
ABCD4-224ENST00000556119 GRXCR2A6NFK2 248 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 KIF28PB7ZC32 967 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 PTGS1P23219 599 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 PSMC6P62333 389 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 ALDH1L2Q3SY69 923 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 PTCRAQ6ISU1 281 aaPredicted RBP16.07■□□□□ 0.16
ABCD4-224ENST00000556119 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 SEZ6LQ9BYH1 1024 aa16.07■□□□□ 0.16
ABCD4-224ENST00000556119 TRIP12Q14669 1992 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-224ENST00000556119 LCHNA4D1U4 455 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 CYP2C9P11712 490 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 ACTN1P12814 892 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 AKR1B1P15121 316 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
ABCD4-224ENST00000556119 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 SNRNP48Q6IEG0 339 aaKnown RBP16.06■□□□□ 0.16
ABCD4-224ENST00000556119 CCDC144CPQ8IYA2 1237 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-224ENST00000556119 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 GPR108Q9NPR9 543 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 GNEQ9Y223 722 aaKnown RBP16.06■□□□□ 0.16
ABCD4-224ENST00000556119 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 TECTAO75443 2155 aa16.06■□□□□ 0.16
ABCD4-224ENST00000556119 ZNF536O15090 1300 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 CYP2D6P10635 497 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 FOXK2Q01167 660 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 FAM83BQ5T0W9 1011 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
ABCD4-224ENST00000556119 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
ABCD4-224ENST00000556119 SIP14410 1827 aa16.05■□□□□ 0.16
ABCD4-224ENST00000556119 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
ABCD4-224ENST00000556119 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
ABCD4-224ENST00000556119 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
ABCD4-224ENST00000556119 TLK2Q86UE8 772 aa16.04■□□□□ 0.16
ABCD4-224ENST00000556119 PRSS33Q8NF86 280 aa16.04■□□□□ 0.16
ABCD4-224ENST00000556119 MFSD14AQ96MC6 490 aa16.04■□□□□ 0.16
ABCD4-224ENST00000556119 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
ABCD4-224ENST00000556119 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
ABCD4-224ENST00000556119 PTPRZ1P23471 2315 aaPredicted RBP16.03■□□□□ 0.16
ABCD4-224ENST00000556119 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
ABCD4-224ENST00000556119 GNAI3P08754 354 aa16.03■□□□□ 0.16
ABCD4-224ENST00000556119 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
ABCD4-224ENST00000556119 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
ABCD4-224ENST00000556119 ANTXR1Q9H6X2 564 aa16.03■□□□□ 0.16
ABCD4-224ENST00000556119 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
ABCD4-224ENST00000556119 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
ABCD4-224ENST00000556119 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
ABCD4-224ENST00000556119 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.16
ABCD4-224ENST00000556119 ANKRD35Q8N283 1001 aa16.02■□□□□ 0.16
ABCD4-224ENST00000556119 NEK9Q8TD19 979 aa16.02■□□□□ 0.16
ABCD4-224ENST00000556119 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
ABCD4-224ENST00000556119 TNKSO95271 1327 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 ATP2A1O14983 1001 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 ZEB2O60315 1214 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 SUPT20HL2P0C7V6 817 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 SMPD1P17405 629 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 RFC2P35250 354 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 ZP2Q05996 745 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 PUS10Q3MIT2 529 aaKnown RBP16.01■□□□□ 0.15
ABCD4-224ENST00000556119 IER5LQ5T953 404 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 SDR42E1Q8WUS8 393 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 SLF1Q9BQI6 1058 aa16.01■□□□□ 0.15
ABCD4-224ENST00000556119 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
ABCD4-224ENST00000556119 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms