RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 NT5C2P49902 561 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 JAKMIP1Q96N16 626 aaKnown RBP12.99□□□□□ -0.33
CHGA-205ENST00000556098 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
CHGA-205ENST00000556098 MROH8Q9H579 483 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 ZNF576Q9H609 170 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 LIMCH1Q9UPQ0 1083 aa12.99□□□□□ -0.33
CHGA-205ENST00000556098 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 GRXCR1A8MXD5 290 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 PDE6AP16499 860 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 DSG3P32926 999 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 KCTD2Q14681 263 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 ALX1Q15699 326 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 IMMTQ16891 758 aaKnown RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 SHCBP1Q8NEM2 672 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 TMX3Q96JJ7 454 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 ZHX1Q9UKY1 873 aaPredicted RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 PHF24Q9UPV7 400 aa12.98□□□□□ -0.33
CHGA-205ENST00000556098 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
CHGA-205ENST00000556098 VCANP13611 3396 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 CDH23Q9H251 3354 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 SCN5AQ14524 2016 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 GPAA1O43292 621 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 PBX2P40425 430 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 ICA1Q05084 483 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 TMEM179Q6ZVK1 233 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 FBXL16Q8N461 479 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 OSBP2Q969R2 916 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 NEK1Q96PY6 1258 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHGA-205ENST00000556098 PPP1R12CQ9BZL4 782 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
CHGA-205ENST00000556098 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 M0R2C6 588 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 ACRP10323 421 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 AKR1A1P14550 325 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 AKR1B1P15121 316 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 RPS6KB1P23443 525 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 TINF2Q9BSI4 451 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 SH2D4AQ9H788 454 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 THEGQ9P2T0 379 aa12.96□□□□□ -0.33
CHGA-205ENST00000556098 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 SLC25A27O95847 323 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 CYP21A2P08686 494 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 ACLYP53396 1101 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 FAAP100Q0VG06 881 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 GIMAP6Q6P9H5 292 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 SEC62Q99442 399 aaKnown RBP12.95□□□□□ -0.34
CHGA-205ENST00000556098 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
CHGA-205ENST00000556098 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
CHGA-205ENST00000556098 ARMT1Q9H993 441 aa12.95□□□□□ -0.34
CHGA-205ENST00000556098 SPTBN5Q9NRC6 3674 aaKnown RBP12.95□□□□□ -0.34
CHGA-205ENST00000556098 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 IGHA2P01877 340 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 AK2P54819 239 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 KCNA10Q16322 511 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 ABRAQ8N0Z2 381 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 PBX4Q9BYU1 374 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 VCPKMTQ9H867 229 aa12.94□□□□□ -0.34
CHGA-205ENST00000556098 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 CTDP1Q9Y5B0 961 aaPredicted RBP12.94□□□□□ -0.34
CHGA-205ENST00000556098 LRRC37A2A6NM11 1700 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 MYADML2A6NDP7 307 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
CHGA-205ENST00000556098 ZNF213O14771 459 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms