RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CASP1P29466 404 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CASP14P31944 242 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CCT6AP40227 531 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 PBX1P40424 430 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 GNAQP50148 359 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 RPS8P62241 208 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 STIM1Q13586 685 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 NPY5RQ15761 445 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 E2F4Q16254 413 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 FAM47AQ5JRC9 791 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 ZNF658Q5TYW1 1059 aaPredicted RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CYP26C1Q6V0L0 522 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 BICDL1Q6ZP65 573 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 RASGRP2Q7LDG7 609 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 APTXQ7Z2E3 356 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CEP112Q8N8E3 955 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CCDC148Q8NFR7 591 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 NLRP3Q96P20 1036 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 NUP88Q99567 741 aaPredicted RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 BLZF1Q9H2G9 400 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 MRPL44Q9H9J2 332 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 LIMA1Q9UHB6 759 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 XDHP47989 1333 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 KCNJ18B7U540 433 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 KCNQ2O43526 872 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 NMT2O60551 498 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 ZRANB2O95218 330 aaKnown RBP eCLIP7.89□□□□□ -1.15
TDP1-213ENST00000555880 RPN1P04843 607 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 CHMP4BP1P59074 171 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 KCNJ12Q14500 433 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 MTF1Q14872 753 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 KRT31Q15323 416 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 TSR1Q2NL82 804 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 SLC10A5Q5PT55 438 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 WWC2Q6AWC2 1192 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 RSRC2Q7L4I2 434 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 NELFBQ8WX92 580 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 STAMQ92783 540 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 CELF1Q92879 486 aaKnown RBP7.89□□□□□ -1.15
TDP1-213ENST00000555880 MCM9Q9NXL9 1143 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 PCDHA4Q9UN74 947 aa7.89□□□□□ -1.15
TDP1-213ENST00000555880 H7C1D1 291 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 WNT7AO00755 349 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 GYPCP04921 128 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 MYL1P05976 194 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 USP5P45974 858 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 COPB1P53618 953 aaKnown RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 GSTO1P78417 241 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 SEMA3FQ13275 785 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 KIF4BQ2VIQ3 1234 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 NOM1Q5C9Z4 860 aaKnown RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 TCP11X2Q5H9J9 407 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 ZNF569Q5MCW4 686 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 DMRTA1Q5VZB9 504 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 GALNT17Q6IS24 598 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 RAD9BQ6WBX8 426 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 DTHD1Q6ZMT9 781 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 SRGAP1Q7Z6B7 1085 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 NBPF5PQ86XG9 351 aaPredicted RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 DGKHQ86XP1 1220 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 PNMA1Q8ND90 353 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 CCDC47Q96A33 483 aaKnown RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 MKNK2Q9HBH9 465 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 ABHD10Q9NUJ1 306 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 MYO1AQ9UBC5 1043 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
TDP1-213ENST00000555880 MYH1P12882 1939 aa7.88□□□□□ -1.15
TDP1-213ENST00000555880 CCDC151A5D8V7 595 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 WTIPA6NIX2 430 aaPredicted RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 LAD1O00515 517 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 ERLIN1O75477 346 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 CYP2D6P10635 497 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 FECHP22830 423 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 PRDX5P30044 214 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 UBA7P41226 1012 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 FXR1P51114 621 aaKnown RBP eCLIP7.87□□□□□ -1.15
TDP1-213ENST00000555880 TFAP4Q01664 338 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 UBXN1Q04323 297 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 GPS2Q13227 327 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 BRD3Q15059 726 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 ADGRD1Q6QNK2 874 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 NAPGQ99747 312 aaPredicted RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 LZTS2Q9BRK4 669 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 PARD6BQ9BYG5 372 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 VPS16Q9H269 839 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 ZNF287Q9HBT7 754 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 DISC1Q9NRI5 854 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TAB2Q9NYJ8 693 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TFCP2L1Q9NZI6 479 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 CDC23Q9UJX2 597 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 TRPC5Q9UL62 973 aaPredicted RBP7.87□□□□□ -1.15
TDP1-213ENST00000555880 CNTNAP4Q9C0A0 1308 aa7.87□□□□□ -1.15
TDP1-213ENST00000555880 NAV1Q8NEY1 1877 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms