RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 MAGEA10P43363 369 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 PSMC4P43686 418 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 PHKA1P46020 1223 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 NT5C2P49902 561 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 PRMT2P55345 433 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 KIF22Q14807 665 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 SUPT20HL1Q3ZLR7 823 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 CPLX2Q6PUV4 134 aaKnown RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 STOX1Q6ZVD7 989 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 TDHQ8IZJ6 230 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 NECAB1Q8N987 351 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 DIS3LQ8TF46 1054 aaKnown RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 TMEM87BQ96K49 555 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 FAM161BQ96MY7 647 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 NACAP1Q9BZK3 213 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 CFAP45Q9UL16 551 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 ZNF804BA4D1E1 1349 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 XDHP47989 1333 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 SALL1Q9NSC2 1324 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 GOLGA6L4A6NEF3 574 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 FIBPO43427 364 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CDKL5O76039 1030 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 FGAP02671 866 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 KLRK1P26718 216 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PLA2G5P39877 138 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 GTF2A2P52657 109 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 RCAN1P53805 252 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CHRNDQ07001 517 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PTPRNQ16849 979 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 TTLL5Q6EMB2 1281 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 C17orf99Q6UX52 265 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 MB21D2Q8IYB1 491 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 C7orf61Q8IZ16 206 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CERS5Q8N5B7 392 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 NSUN7Q8NE18 718 aaKnown RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PAWRQ96IZ0 340 aaKnown RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PRMT6Q96LA8 375 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 ZNF396Q96N95 335 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PPP1R9BQ96SB3 815 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 KRT23Q9C075 422 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 ANKRD2Q9GZV1 360 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 PUS7LQ9H0K6 701 aaKnown RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 TSPY26PQ9H489 355 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 BIN2Q9UBW5 565 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 CNPY2Q9Y2B0 182 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 ECM29Q5VYK3 1845 aa7.54□□□□□ -1.2
PSEN1-214ENST00000555867 COL1A1P02452 1464 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-214ENST00000555867 MYO3BQ8WXR4 1341 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 BDP1A6H8Y1 2624 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 TCRBV5S4A2TA0A5A2 114 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 SYCE3A1L190 88 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PTPDC1A2A3K4 754 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PRC1O43663 620 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 TFRCP02786 760 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 GTF2IP78347 998 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PRKCZQ05513 592 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 SCRN1Q12765 414 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 STK3Q13188 491 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 VGLL4Q14135 290 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 RASA3Q14644 834 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 SART3Q15020 963 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 DLGAP5Q15398 846 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 KRI1Q8N9T8 703 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 SPATA32Q96LK8 384 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 ZFP42Q96MM3 310 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 TCEANC2Q96MN5 208 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 NAPBQ9H115 298 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PIH1D3Q9NQM4 214 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 DDX19AQ9NUU7 478 aaKnown RBP7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PCDHGC3Q9UN70 934 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 GABRQQ9UN88 632 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 PPP2R3BQ9Y5P8 575 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 TAF6LQ9Y6J9 622 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 NID2Q14112 1375 aa7.53□□□□□ -1.2
PSEN1-214ENST00000555867 MYPNQ86TC9 1320 aa7.52□□□□□ -1.2
PSEN1-214ENST00000555867 CPLX1O14810 134 aa7.52□□□□□ -1.21
PSEN1-214ENST00000555867 CAVIN2O95810 425 aa7.52□□□□□ -1.21
PSEN1-214ENST00000555867 APPP05067 770 aa7.52□□□□□ -1.21
PSEN1-214ENST00000555867 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms