RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 ENAHQ8N8S7 591 aaPredicted RBP9.05□□□□□ -0.96
LINC00641-202ENST00000555688 PHKBQ93100 1093 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 C8orf76Q96K31 380 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 SPATA32Q96LK8 384 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 AIFM3Q96NN9 605 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 RCOR1Q9UKL0 485 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 TNKSO95271 1327 aa9.05□□□□□ -0.96
LINC00641-202ENST00000555688 LAMB1P07942 1786 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 UBE2Q2LH0YL09 131 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 PRDM1O75626 825 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 LDHCP07864 332 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 IFNAR1P17181 557 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 WDR4P57081 412 aaKnown RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 SART3Q15020 963 aaKnown RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 CCDC183Q5T5S1 534 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ATL3Q6DD88 541 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 C1orf216Q8TAB5 229 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 USP28Q96RU2 1077 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 FTOQ9C0B1 505 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 COA1Q9GZY4 146 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ARPP21Q9UBL0 812 aaPredicted RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 CFAP45Q9UL16 551 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 CDK5RAP2Q96SN8 1893 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 DLEC1Q9Y238 1755 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ERICH2A1L162 156 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 CDKL5O76039 1030 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 BAG3O95817 575 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 TIMP2P16035 220 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 LIG1P18858 919 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 IARSP41252 1262 aaKnown RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 RHBDL3P58872 404 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 OCLNQ16625 522 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 MFSD14BQ5SR56 506 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ZNF654Q8IZM8 581 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 FANCBQ8NB91 859 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 TBC1D22AQ8WUA7 517 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 UBAC1Q9BSL1 405 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 ALG1Q9BT22 464 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
LINC00641-202ENST00000555688 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
LINC00641-202ENST00000555688 GAKO14976 1311 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 STK36Q9NRP7 1315 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 ECM29Q5VYK3 1845 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 STAU1O95793 577 aaKnown RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 BTDP43251 543 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 KIF23Q02241 960 aaPredicted RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 TROAPQ12815 778 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 CBLBQ13191 982 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 RTN1Q16799 776 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 SYNE3Q6ZMZ3 975 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 CRACR2BQ8N4Y2 399 aaPredicted RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 CERS5Q8N5B7 392 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 KDF1Q8NAX2 398 aaPredicted RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 TGFBRAP1Q8WUH2 860 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 FUCA2Q9BTY2 467 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 ZC3H12CQ9C0D7 883 aaKnown RBP9.03□□□□□ -0.96
LINC00641-202ENST00000555688 QSER1Q2KHR3 1735 aa9.03□□□□□ -0.96
LINC00641-202ENST00000555688 SLX4Q8IY92 1834 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 NMT2O60551 498 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 PRMT3O60678 531 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 WEE1P30291 646 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 USP5P45974 858 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 PLCD1P51178 756 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 SSRP1Q08945 709 aaKnown RBP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 FAM47AQ5JRC9 791 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 KRT40Q6A162 431 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 STYK1Q6J9G0 422 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 RCSD1Q6JBY9 416 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 DPP8Q6V1X1 898 aaPredicted RBP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 C2CD5Q86YS7 1000 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 C7orf43Q8WVR3 580 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 ZNF396Q96N95 335 aaPredicted RBP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 ZFAND3Q9H8U3 227 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 RTEL1Q9NZ71 1219 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 CXXC1Q9P0U4 656 aaPredicted RBP9.02□□□□□ -0.97
LINC00641-202ENST00000555688 ROBO3Q96MS0 1386 aa9.02□□□□□ -0.97
LINC00641-202ENST00000555688 CCDC196A0A1B0GTZ2 297 aa9.01□□□□□ -0.97
LINC00641-202ENST00000555688 LETM1O95202 739 aaPredicted RBP9.01□□□□□ -0.97
LINC00641-202ENST00000555688 POLR3DP05423 398 aaPredicted RBP9.01□□□□□ -0.97
LINC00641-202ENST00000555688 SLC3A2P08195 630 aaKnown RBP9.01□□□□□ -0.97
LINC00641-202ENST00000555688 U2AF2P26368 475 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC00641-202ENST00000555688 CEBPZQ03701 1054 aaKnown RBP9.01□□□□□ -0.97
LINC00641-202ENST00000555688 PDE4BQ07343 736 aa9.01□□□□□ -0.97
LINC00641-202ENST00000555688 PPP2R5BQ15173 497 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms