RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 NECAB3Q96P71 396 aaPredicted RBP11.12□□□□□ -0.63
PRKCH-218ENST00000555628 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
PRKCH-218ENST00000555628 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
PRKCH-218ENST00000555628 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
PRKCH-218ENST00000555628 MROH8Q9H579 483 aa11.12□□□□□ -0.63
PRKCH-218ENST00000555628 ADAMTS5Q9UNA0 930 aa11.12□□□□□ -0.63
PRKCH-218ENST00000555628 RARBP10826 455 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 ZAP70P43403 619 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 CDK7P50613 346 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
PRKCH-218ENST00000555628 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
PRKCH-218ENST00000555628 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
PRKCH-218ENST00000555628 TMEM39AQ9NV64 488 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 HOXC10Q9NYD6 342 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
PRKCH-218ENST00000555628 PRRC2BQ5JSZ5 2229 aaKnown RBP11.11□□□□□ -0.63
PRKCH-218ENST00000555628 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 GREB1LQ9C091 1923 aaPredicted RBP11.1□□□□□ -0.63
PRKCH-218ENST00000555628 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 ACLYP53396 1101 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 COPS2P61201 443 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 TMEM132BQ14DG7 1078 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 RNF180Q86T96 592 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 SLC44A5Q8NCS7 719 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 REPS2Q8NFH8 660 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
PRKCH-218ENST00000555628 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
PRKCH-218ENST00000555628 CXXC1Q9P0U4 656 aaPredicted RBP11.1□□□□□ -0.63
PRKCH-218ENST00000555628 DBNLQ9UJU6 430 aaKnown RBP11.1□□□□□ -0.63
PRKCH-218ENST00000555628 YBX2Q9Y2T7 364 aaKnown RBP11.1□□□□□ -0.63
PRKCH-218ENST00000555628 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 ADCY6O43306 1168 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 PGK2P07205 417 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 CFHP08603 1231 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 GNAI3P08754 354 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 CSF2RAP15509 400 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 CST5P28325 142 aaPredicted RBP11.09□□□□□ -0.63
PRKCH-218ENST00000555628 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 KRI1Q8N9T8 703 aaKnown RBP11.09□□□□□ -0.63
PRKCH-218ENST00000555628 MIGA1Q8NAN2 632 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
PRKCH-218ENST00000555628 TLR7Q9NYK1 1049 aaKnown RBP11.09□□□□□ -0.63
PRKCH-218ENST00000555628 DIS3Q9Y2L1 958 aaKnown RBP11.09□□□□□ -0.63
PRKCH-218ENST00000555628 MYH8P13535 1937 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
PRKCH-218ENST00000555628 MCM3APO60318 1980 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 MOXD2PA6NHM9 499 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 CTAGE5O15320 804 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
PRKCH-218ENST00000555628 FCER1AP12319 257 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 AKR1A1P14550 325 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 CYP7A1P22680 504 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 RIOX2Q8IUF8 465 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 FAM9BQ8IZU0 186 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 C1QTNF1Q9BXJ1 281 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 C11orf16Q9NQ32 467 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
PRKCH-218ENST00000555628 ZNF214Q9UL59 606 aaPredicted RBP11.08□□□□□ -0.64
PRKCH-218ENST00000555628 DNAJC25-GNG10A0A024R161 153 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 DCDC2CA8MYV0 355 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 SNAI1O95863 264 aaPredicted RBP11.07□□□□□ -0.64
PRKCH-218ENST00000555628 CD4P01730 458 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 NKX3-2P78367 333 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 TFF2Q03403 129 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRKCH-218ENST00000555628 TTC39AQ5SRH9 613 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 ZNF365Q70YC5 407 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 FGD4Q96M96 766 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 LRFN3Q9BTN0 628 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
PRKCH-218ENST00000555628 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 STARD7Q9NQZ5 370 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 ELP1O95163 1332 aa11.07□□□□□ -0.64
PRKCH-218ENST00000555628 TRIOO75962 3097 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 FLOT1O75955 427 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 SLC25A27O95847 323 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 ACRP10323 421 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 POU3F3P20264 500 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-218ENST00000555628 USP5P45974 858 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 KCNQ1P51787 676 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 RARSP54136 660 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms