RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GPR20Q99678 358 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 ANTXR1Q9H6X2 564 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 ADAMTS1Q9UHI8 967 aa6.83□□□□□ -1.32
SNX6-204ENST00000555541 CTSKP43235 329 aa6.82□□□□□ -1.32
SNX6-204ENST00000555541 MAGEA10P43363 369 aaPredicted RBP6.82□□□□□ -1.32
SNX6-204ENST00000555541 ADAM17P78536 824 aa6.82□□□□□ -1.32
SNX6-204ENST00000555541 SLCO6A1Q86UG4 719 aa6.82□□□□□ -1.32
SNX6-204ENST00000555541 TMEM52Q8NDY8 209 aa6.82□□□□□ -1.32
SNX6-204ENST00000555541 ZNF512BQ96KM6 892 aaPredicted RBP6.82□□□□□ -1.32
SNX6-204ENST00000555541 TNFRSF10DQ9UBN6 386 aa6.82□□□□□ -1.32
SNX6-204ENST00000555541 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
SNX6-204ENST00000555541 K7ESM1 405 aa6.81□□□□□ -1.32
SNX6-204ENST00000555541 FKTNO75072 461 aa6.81□□□□□ -1.32
SNX6-204ENST00000555541 FCRL2Q96LA5 508 aaPredicted RBP6.81□□□□□ -1.32
SNX6-204ENST00000555541 UBP1Q9NZI7 540 aa6.81□□□□□ -1.32
SNX6-204ENST00000555541 ACSL6Q9UKU0 697 aa6.81□□□□□ -1.32
SNX6-204ENST00000555541 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
SNX6-204ENST00000555541 NME1P15531 152 aaKnown RBP6.8□□□□□ -1.32
SNX6-204ENST00000555541 CCNFP41002 786 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 RAD51AP2Q09MP3 1159 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 MLECQ14165 292 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 RAB3GAP1Q15042 981 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 GALNT18Q6P9A2 607 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 RPTNQ6XPR3 784 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 NLRC3Q7RTR2 1065 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
SNX6-204ENST00000555541 RBM15Q96T37 977 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNX6-204ENST00000555541 MRS2Q9HD23 443 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 CHST7Q9NS84 486 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 ERVK13-1Q9NX77 482 aa6.8□□□□□ -1.32
SNX6-204ENST00000555541 MEIS3P2A8K0S8 358 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 C1QTNF3-AMACRE9PGA6 284 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 ZNF205O95201 554 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 LIMS1P48059 325 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 HTRA3P83110 453 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 DLX2Q07687 328 aaPredicted RBP6.79□□□□□ -1.32
SNX6-204ENST00000555541 LAPTM5Q13571 262 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 MRPL58Q14197 206 aaKnown RBP6.79□□□□□ -1.32
SNX6-204ENST00000555541 LDLRAD1Q5T700 205 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 LIPIQ6XZB0 460 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 ADGRG2Q8IZP9 1017 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 DUSP10Q9Y6W6 482 aa6.79□□□□□ -1.32
SNX6-204ENST00000555541 A0A1B0GTL3 188 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 WTIPA6NIX2 430 aaPredicted RBP6.78□□□□□ -1.32
SNX6-204ENST00000555541 CLEC3AO75596 197 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 BMP8BP34820 402 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 ZNF827Q17R98 1081 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
SNX6-204ENST00000555541 SEZ6Q53EL9 994 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 FERMT3Q86UX7 667 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 SLITRK4Q8IW52 837 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 FNIP1Q8TF40 1166 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 SLC9A7Q96T83 725 aa6.78□□□□□ -1.32
SNX6-204ENST00000555541 GPR55Q9Y2T6 319 aaPredicted RBP6.78□□□□□ -1.32
SNX6-204ENST00000555541 SSU72P8A0A1W2PR75 194 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 SH3D21A4FU49 640 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 NUDT19A8MXV4 375 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 SHOXO15266 292 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 ITGB3P05106 788 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 VAV1P15498 845 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 CHMP4BP1P59074 171 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 RTP2Q5QGT7 225 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 UBXN11Q5T124 520 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 SLC16A11Q8NCK7 471 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 GFOD1Q9NXC2 390 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
SNX6-204ENST00000555541 MSL3P1P0C860 447 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 ACRP10323 421 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 PRKCAP17252 672 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 ERCC3P19447 782 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 ARL4AP40617 200 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 AUHQ13825 339 aaKnown RBP6.76□□□□□ -1.33
SNX6-204ENST00000555541 NT5DC1Q5TFE4 455 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 SAPCD2Q86UD0 394 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
SNX6-204ENST00000555541 SLC6A18Q96N87 628 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 C1QTNF3Q9BXJ4 246 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 TAF6LQ9Y6J9 622 aa6.76□□□□□ -1.33
SNX6-204ENST00000555541 A0A1W2PQ45 241 aaPredicted RBP6.75□□□□□ -1.33
SNX6-204ENST00000555541 A0A1W2PQY0 241 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 OVOL3O00110 214 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 JMJD8Q96S16 334 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 NT5C1AQ9BXI3 368 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 PRR13Q9NZ81 148 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 GGT7Q9UJ14 662 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 PALD1Q9ULE6 856 aa6.75□□□□□ -1.33
SNX6-204ENST00000555541 C9IYK1 514 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 MEIS1O00470 390 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 NOBOXO60393 691 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 ATF2P15336 505 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
SNX6-204ENST00000555541 CYP4F8P98187 520 aa6.74□□□□□ -1.33
SNX6-204ENST00000555541 INTS3Q68E01 1043 aaKnown RBP6.74□□□□□ -1.33
SNX6-204ENST00000555541 NLGN1Q8N2Q7 840 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms