RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 DNAJC18Q9H819 358 aa27.49■■□□□ 1.99
TMEM260-207ENST00000555497 ZNF646O15015 1829 aaPredicted RBP27.49■■□□□ 1.99
TMEM260-207ENST00000555497 COBLO75128 1261 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 STAT6P42226 847 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 TBX2Q13207 712 aaPredicted RBP27.48■■□□□ 1.99
TMEM260-207ENST00000555497 DACT2Q5SW24 774 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 SOGA3Q5TF21 947 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 SYNRGQ9UMZ2 1314 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 SIPA1L1O43166 1804 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 TXLNAP40222 546 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 JAKMIP3Q5VZ66 844 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 MYO3BQ8WXR4 1341 aa27.48■■□□□ 1.99
TMEM260-207ENST00000555497 ECE2O60344 883 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 CCNT1O60563 726 aaKnown RBP27.47■■□□□ 1.99
TMEM260-207ENST00000555497 TTBK2Q6IQ55 1244 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 PLIN2Q99541 437 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 TMX1Q9H3N1 280 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 MYH4Q9Y623 1939 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 ESYT2A0FGR8 921 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 LAD1O00515 517 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 PRPHP41219 470 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 ZNF543Q08ER8 600 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 TCP10Q12799 353 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 SHROOM1Q2M3G4 852 aaPredicted RBP27.47■■□□□ 1.99
TMEM260-207ENST00000555497 STRIP1Q5VSL9 837 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 TBCKQ8TEA7 893 aa27.47■■□□□ 1.99
TMEM260-207ENST00000555497 FAM196BA6NMK8 535 aa27.46■■□□□ 1.99
TMEM260-207ENST00000555497 MPHOSPH10O00566 681 aaKnown RBP27.46■■□□□ 1.99
TMEM260-207ENST00000555497 HLA-DOAP06340 250 aa27.46■■□□□ 1.99
TMEM260-207ENST00000555497 DHX8Q14562 1220 aaKnown RBP27.46■■□□□ 1.99
TMEM260-207ENST00000555497 NR1I3Q14994 352 aa27.46■■□□□ 1.99
TMEM260-207ENST00000555497 CEP135Q66GS9 1140 aa27.46■■□□□ 1.99
TMEM260-207ENST00000555497 CCSER1Q9C0I3 900 aa27.46■■□□□ 1.99
TMEM260-207ENST00000555497 RPN1P04843 607 aaKnown RBP27.45■■□□□ 1.99
TMEM260-207ENST00000555497 RXRBP28702 533 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 PTPN14Q15678 1187 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 CDKAL1Q5VV42 579 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 NEK8Q86SG6 692 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 REXO1Q8N1G1 1221 aaKnown RBP27.45■■□□□ 1.99
TMEM260-207ENST00000555497 JMJD4Q9H9V9 463 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 CTNND2Q9UQB3 1225 aa27.45■■□□□ 1.99
TMEM260-207ENST00000555497 DDTLA6NHG4 134 aaPredicted RBP27.45■■□□□ 1.98
TMEM260-207ENST00000555497 RRAGBQ5VZM2 374 aa27.45■■□□□ 1.98
TMEM260-207ENST00000555497 FAM198AQ9UFP1 575 aa27.45■■□□□ 1.98
TMEM260-207ENST00000555497 A0A1B0GTH6 734 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 EDIL3O43854 480 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 PPP1R11O60927 126 aaPredicted RBP27.44■■□□□ 1.98
TMEM260-207ENST00000555497 OR52Z1P0C646 297 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 ADGRF4Q8IZF3 695 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 MRIQ9BWK5 157 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 EHD4Q9H223 541 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 UBA7P41226 1012 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 KCNJ6P48051 423 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 ATP2B2Q01814 1243 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 SH3BP5LQ7L8J4 393 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 C7orf43Q8WVR3 580 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 PDCL3Q9H2J4 239 aa27.44■■□□□ 1.98
TMEM260-207ENST00000555497 TEX33O43247 280 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 TMEM139Q8IV31 216 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 ZNF592Q92610 1267 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 PPP1R13BQ96KQ4 1090 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 GDAQ9Y2T3 454 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 GOLGB1Q14789 3259 aaKnown RBP27.43■■□□□ 1.98
TMEM260-207ENST00000555497 C10orf71Q711Q0 1435 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 SLC16A2P36021 539 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 RBM5P52756 815 aaKnown RBP eCLIP27.43■■□□□ 1.98
TMEM260-207ENST00000555497 FKBP1AP62942 108 aaKnown RBP27.43■■□□□ 1.98
TMEM260-207ENST00000555497 AOC3Q16853 763 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 ZNF658Q5TYW1 1059 aaPredicted RBP27.43■■□□□ 1.98
TMEM260-207ENST00000555497 SPECC1LQ69YQ0 1117 aa27.43■■□□□ 1.98
TMEM260-207ENST00000555497 hCG_1984214I3L0E3 225 aa27.42■■□□□ 1.98
TMEM260-207ENST00000555497 ZNF713Q8N859 430 aaPredicted RBP27.42■■□□□ 1.98
TMEM260-207ENST00000555497 PSDA5PKW4 1024 aaPredicted RBP27.41■■□□□ 1.98
TMEM260-207ENST00000555497 KCTD1Q719H9 257 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 RASSF8Q8NHQ8 419 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 ADCY7P51828 1080 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 POTEDQ86YR6 584 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 KBTBD4Q9NVX7 518 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 PAXBP1Q9Y5B6 917 aa27.41■■□□□ 1.98
TMEM260-207ENST00000555497 PNMA6FA0A0J9YX94 578 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 TC2NQ8N9U0 490 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 IDI2Q9BXS1 227 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 ADD3Q9UEY8 706 aaKnown RBP27.4■■□□□ 1.98
TMEM260-207ENST00000555497 MAPK8IP1Q9UQF2 711 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 KLRC4O43908 158 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 TECP42680 631 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 HDLBPQ00341 1268 aaKnown RBP27.4■■□□□ 1.98
TMEM260-207ENST00000555497 EZH2Q15910 746 aaKnown RBP27.4■■□□□ 1.98
TMEM260-207ENST00000555497 CABP7Q86V35 215 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 ZNF710Q8N1W2 664 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 CCDC112Q8NEF3 446 aa27.4■■□□□ 1.98
TMEM260-207ENST00000555497 USP17L10C9JJH3 530 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 PLCG1P19174 1290 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 PRCPP42785 496 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 ADKP55263 362 aaKnown RBP27.39■■□□□ 1.98
TMEM260-207ENST00000555497 SLC15A2Q16348 729 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 CCDC96Q2M329 555 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 CCDC17Q96LX7 622 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 RMND1Q9NWS8 449 aa27.39■■□□□ 1.98
TMEM260-207ENST00000555497 RWDD2AQ9UIY3 292 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms