RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 SPATC1LQ9H0A9 340 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 VAT1LQ9HCJ6 419 aa14.72□□□□□ -0.05
SYNE2-219ENST00000555323 PARP14Q460N5 1801 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 PNMA6FA0A0J9YX94 578 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 PRPF3O43395 683 aaKnown RBP14.71□□□□□ -0.05
SYNE2-219ENST00000555323 PEX10O60683 326 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 CCNA1P78396 465 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 SP3Q02447 781 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 STK3Q13188 491 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 PIGSQ96S52 555 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 PAGR1Q9BTK6 254 aa14.71□□□□□ -0.05
SYNE2-219ENST00000555323 MOV10L1Q9BXT6 1211 aaKnown RBP14.71□□□□□ -0.05
SYNE2-219ENST00000555323 NCOA5Q9HCD5 579 aaKnown RBP14.71□□□□□ -0.05
SYNE2-219ENST00000555323 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
SYNE2-219ENST00000555323 SLC25A27O95847 323 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 COPB2P35606 906 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 SNAP25P60880 206 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 ST3GAL1Q11201 340 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 TRAF1Q13077 416 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CDC37Q16543 378 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 QRICH1Q2TAL8 776 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 TKFCQ3LXA3 575 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CPLX2Q6PUV4 134 aaKnown RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CPXCR1Q8N123 301 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CCDC82Q8N4S0 544 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 NECAB1Q8N987 351 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 RRP36Q96EU6 259 aaKnown RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 TMX3Q96JJ7 454 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 RNF26Q9BY78 433 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 MAF1Q9H063 256 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 RIPK3Q9Y572 518 aa14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CTDP1Q9Y5B0 961 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 V9GY48 417 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-219ENST00000555323 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 CPLX1O14810 134 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 FKTNO75072 461 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 CTDNEP1O95476 244 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 HSPA1AP0DMV8 641 aaKnown RBP14.69□□□□□ -0.06
SYNE2-219ENST00000555323 HSPA1BP0DMV9 641 aaKnown RBP14.69□□□□□ -0.06
SYNE2-219ENST00000555323 NOL8Q76FK4 1167 aaKnown RBP14.69□□□□□ -0.06
SYNE2-219ENST00000555323 AGBL1Q96MI9 1066 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 LLPHQ9BRT6 129 aaKnown RBP14.69□□□□□ -0.06
SYNE2-219ENST00000555323 AMNQ9BXJ7 453 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 MROH8Q9H579 483 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
SYNE2-219ENST00000555323 FOXN1O15353 648 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 PPP1R11O60927 126 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-219ENST00000555323 CDKL5O76039 1030 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-219ENST00000555323 ERCC3P19447 782 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 MAPK4P31152 587 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 LACTBP83111 547 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-219ENST00000555323 PLS1Q14651 629 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 PKN1Q16512 942 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 SNRNP48Q6IEG0 339 aaKnown RBP14.68□□□□□ -0.06
SYNE2-219ENST00000555323 CCDC174Q6PII3 467 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 FBXO11Q86XK2 927 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 CHST13Q8NET6 341 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-219ENST00000555323 PORCNQ9H237 461 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 CCPG1Q9ULG6 757 aa14.68□□□□□ -0.06
SYNE2-219ENST00000555323 STRNO43815 780 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 HSPA8P11142 646 aaKnown RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 CTGFP29279 349 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 CTCFP49711 727 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 SSRP1Q08945 709 aaKnown RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 CUL4AQ13619 759 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 HOMER1Q86YM7 354 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 ABRAQ8N0Z2 381 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 RGS22Q8NE09 1264 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 PHKBQ93100 1093 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 TRERF1Q96PN7 1200 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 EFCC1Q9HA90 598 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
SYNE2-219ENST00000555323 FBXO40Q9UH90 709 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 PCDHA1Q9Y5I3 950 aa14.67□□□□□ -0.06
SYNE2-219ENST00000555323 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 hCG_1984214I3L0E3 225 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 DEXIO95424 95 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 GNRH1P01148 92 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 GPR142Q7Z601 462 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 NCAPG2Q86XI2 1143 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 CCDC83Q8IWF9 413 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 TRIM22Q8IYM9 498 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 ZNF713Q8N859 430 aaPredicted RBP14.66□□□□□ -0.06
SYNE2-219ENST00000555323 CLEC4DQ8WXI8 215 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 ERO1AQ96HE7 468 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 MRPL11Q9Y3B7 192 aaKnown RBP14.66□□□□□ -0.06
SYNE2-219ENST00000555323 ABCB11O95342 1321 aa14.66□□□□□ -0.06
SYNE2-219ENST00000555323 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms