RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 KIF5CO60282 957 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 NOP2P46087 812 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 PAK1Q13153 545 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 MCM6Q14566 821 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 PAGR1Q9BTK6 254 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
ARHGEF40-206ENST00000555232 BACH1O14867 736 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 FLOT1O75955 427 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 DPF2Q92785 391 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 NOC4LQ9BVI4 516 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 PCDHA4Q9UN74 947 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 TESPA1A2RU30 521 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 TROAPQ12815 778 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 SPA17Q15506 151 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 ZNF569Q5MCW4 686 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 RASA1P20936 1047 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 ALX1Q15699 326 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 CLEC17AQ6ZS10 378 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 GOLGA6L1Q8N7Z2 621 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 ARHGEF10LQ9HCE6 1279 aa13.69□□□□□ -0.22
ARHGEF40-206ENST00000555232 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 CDC42EP5Q6NZY7 148 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 TDRD7Q8NHU6 1098 aaKnown RBP13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 FERMT2Q96AC1 680 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 PLCG1P19174 1290 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 STAT3P40763 770 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
ARHGEF40-206ENST00000555232 USP27XA6NNY8 438 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 LRRC8AQ8IWT6 810 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 ZNF397Q8NF99 534 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 RIC1Q4ADV7 1423 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 MLKLQ8NB16 471 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 CCDC150Q8NCX0 1101 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 TMEM39BQ9GZU3 492 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 PTPREP23469 700 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■■■■□ 25.8
ARHGEF40-206ENST00000555232 TNIP1Q15025 636 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 METTL16Q86W50 562 aaKnown RBP13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 KCNB2Q92953 911 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 TACC3Q9Y6A5 838 aa13.67□□□□□ -0.22
ARHGEF40-206ENST00000555232 XRN1Q8IZH2 1706 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 RHOXF2BP0C7M4 288 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 SYCP1Q15431 976 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 SAMD7Q7Z3H4 446 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 BICD1Q96G01 975 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 PRMT6Q96LA8 375 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 LUC7L2Q9Y383 392 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 F5H6K3 240 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 FAM13AO94988 1023 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 KLRC3Q07444 240 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 PFKFB3Q16875 520 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 TCHPQ9BT92 498 aa13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 SRPRBQ9Y5M8 271 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-206ENST00000555232 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 PPP6R2O75170 966 aa13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 ADRA2BP18089 450 aa13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 LLGL1Q15334 1064 aa13.65□□□□□ -0.22
ARHGEF40-206ENST00000555232 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms