RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 GRIN3AQ8TCU5 1115 aa4.77□□□□□ -1.65
KTN1-220ENST00000555172 SLC7A3Q8WY07 619 aa4.77□□□□□ -1.65
KTN1-220ENST00000555172 RUSC1Q9BVN2 902 aa4.77□□□□□ -1.65
KTN1-220ENST00000555172 RHOBTB2Q9BYZ6 727 aa4.77□□□□□ -1.65
KTN1-220ENST00000555172 SOX17Q9H6I2 414 aaPredicted RBP4.77□□□□□ -1.65
KTN1-220ENST00000555172 DDAH1O94760 285 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 RAPGEF3O95398 923 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 EYA4O95677 639 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 PRNPP04156 253 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 CYP11A1P05108 521 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 GIPRP48546 466 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 GEMIN4P57678 1058 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 PIP4K2BP78356 416 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 GPSM2P81274 684 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 GSTM4Q03013 218 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 STRN3Q13033 797 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 PPP2R5EQ16537 467 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 RASIP1Q5U651 963 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 MAP1SQ66K74 1059 aaPredicted RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 WWC2Q6AWC2 1192 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 REC114Q7Z4M0 266 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 TPH2Q8IWU9 490 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 SUGP1Q8IWZ8 645 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 SDR16C5Q8N3Y7 309 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 TEX19Q8NA77 164 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 OR6P1Q8NGX9 317 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 RNF208Q9H0X6 261 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 NGRNQ9NPE2 291 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 OBP2AQ9NY56 170 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 HDAC9Q9UKV0 1011 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 FAM50BQ9Y247 325 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 RASSF10A6NK89 507 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 SOX1O00570 391 aaPredicted RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 PAPLNO95428 1278 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 GSTP1P09211 210 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 NBPF7P0C2Y1 421 aaPredicted RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 C19orf57Q0VDD7 668 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 HLTFQ14527 1009 aaKnown RBP eCLIP4.76□□□□□ -1.653e-7■□□□□ 8.3
KTN1-220ENST00000555172 NFKBIBQ15653 356 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 FXNQ16595 210 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 CCDC93Q567U6 631 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 NXNQ6DKJ4 435 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 DRC7Q8IY82 874 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 STK35Q8TDR2 534 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 COG1Q8WTW3 980 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 WNT8BQ93098 351 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 ACSBG1Q96GR2 724 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 FBXL18Q96ME1 805 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 CDC5LQ99459 802 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 CORO1BQ9BR76 489 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 LRRC27Q9C0I9 530 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 BRMS1Q9HCU9 246 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 PAK6Q9NQU5 681 aaPredicted RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 USP25Q9UHP3 1055 aa4.76□□□□□ -1.65
KTN1-220ENST00000555172 PUF60Q9UHX1 559 aaKnown RBP4.76□□□□□ -1.65
KTN1-220ENST00000555172 APAF1O14727 1248 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 DRD2P14416 443 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 RPL6Q02878 288 aaKnown RBP4.75□□□□□ -1.65
KTN1-220ENST00000555172 ZNF252P-AS1Q0IIN9 211 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 GFOD2Q3B7J2 385 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 TMEM67Q5HYA8 995 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 CC2D1AQ6P1N0 951 aaPredicted RBP4.75□□□□□ -1.65
KTN1-220ENST00000555172 CNNM4Q6P4Q7 775 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 RUFY4Q6ZNE9 571 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 GK5Q6ZS86 529 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 ZBTB46Q86UZ6 589 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 VSIG10LQ86VR7 867 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 CPXCR1Q8N123 301 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 SYNPOQ8N3V7 929 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 C12orf50Q8NA57 414 aaPredicted RBP4.75□□□□□ -1.65
KTN1-220ENST00000555172 ZSWIM2Q8NEG5 633 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 FLCNQ8NFG4 579 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 RIN3Q8TB24 985 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 PARD3BQ8TEW8 1205 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 USP33Q8TEY7 942 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 FBLIM1Q8WUP2 373 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 JPH3Q8WXH2 748 aaPredicted RBP4.75□□□□□ -1.65
KTN1-220ENST00000555172 CLUHP3Q96NS8 147 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 OSGEPQ9NPF4 335 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 IPPQ9Y573 584 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
KTN1-220ENST00000555172 CARMIL2Q6F5E8 1435 aa4.75□□□□□ -1.65
KTN1-220ENST00000555172 FAM170BA6NMN3 283 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 CYP26A1O43174 497 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 ADCY3O60266 1144 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 TRIM27P14373 513 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 JUNBP17275 347 aaPredicted RBP4.74□□□□□ -1.65
KTN1-220ENST00000555172 L1CAMP32004 1257 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 HALP42357 657 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 PPM1FP49593 454 aaPredicted RBP4.74□□□□□ -1.65
KTN1-220ENST00000555172 PICALMQ13492 652 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 ALFQ53S48 1182 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 FOXB2Q5VYV0 432 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 ZKSCAN2Q63HK3 967 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 CDPF1Q6NVV7 123 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 PDZD3Q86UT5 571 aa4.74□□□□□ -1.65
KTN1-220ENST00000555172 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
KTN1-220ENST00000555172 LEO1Q8WVC0 666 aaPredicted RBP4.74□□□□□ -1.65
KTN1-220ENST00000555172 SECISBP2LQ93073 1101 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms