RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
TMEM260-206ENST00000555046 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 DDAH1O94760 285 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 FCER1AP12319 257 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 IRF5Q13568 498 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 CHST3Q7LGC8 479 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 GPR142Q7Z601 462 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 RIOX2Q8IUF8 465 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
TMEM260-206ENST00000555046 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
TMEM260-206ENST00000555046 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
TMEM260-206ENST00000555046 TM6SF1Q9BZW5 370 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
TMEM260-206ENST00000555046 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
TMEM260-206ENST00000555046 CDH23Q9H251 3354 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 SH2B2O14492 632 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-206ENST00000555046 CNMDO75829 334 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 XRCC5P13010 732 aaKnown RBP12.34□□□□□ -0.43
TMEM260-206ENST00000555046 ERCC3P19447 782 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-206ENST00000555046 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 MAF1Q9H063 256 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 LY9Q9HBG7 655 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
TMEM260-206ENST00000555046 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 KLRF2D3W0D1 207 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
TMEM260-206ENST00000555046 PTPREP23469 700 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 RGS2P41220 211 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 FLT3LGP49771 235 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 RCAN1P53805 252 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 ANTXR2P58335 489 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 TROAPQ12815 778 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 KCTD2Q14681 263 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 SNRNP48Q6IEG0 339 aaKnown RBP12.33□□□□□ -0.44
TMEM260-206ENST00000555046 DPP9Q86TI2 863 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 ZNF214Q9UL59 606 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-206ENST00000555046 BDP1A6H8Y1 2624 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-206ENST00000555046 RPTORQ8N122 1335 aa12.33□□□□□ -0.44
TMEM260-206ENST00000555046 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 ICAM1P05362 532 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 CAPN2P17655 700 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 SLC16A2P36021 539 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 UBXN2AP68543 259 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 PRKCZQ05513 592 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 GRM4Q14833 912 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 RUFY3Q7L099 469 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 FANCBQ8NB91 859 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 PORCNQ9H237 461 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 BIN2Q9UBW5 565 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-206ENST00000555046 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
TMEM260-206ENST00000555046 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
TMEM260-206ENST00000555046 GOLGA8HP0CJ92 632 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 CTGFP29279 349 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 GRK4P32298 578 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 MAP2K5Q13163 448 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 ANKRD1Q15327 319 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 MORN1Q5T089 497 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 UBE2Q1Q7Z7E8 422 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 MMP19Q99542 508 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms