RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 SLC45A1Q9Y2W3 748 aa19.97■□□□□ 0.79
SHOX-204ENST00000554971 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
SHOX-204ENST00000554971 FAM173BQ6P4H8 233 aa19.96■□□□□ 0.79
SHOX-204ENST00000554971 TYRO3Q06418 890 aa19.96■□□□□ 0.79
SHOX-204ENST00000554971 KCTD1Q719H9 257 aa19.96■□□□□ 0.79
SHOX-204ENST00000554971 DDX11Q96FC9 970 aa19.96■□□□□ 0.79
SHOX-204ENST00000554971 ZCCHC17Q9NP64 241 aaKnown RBP19.96■□□□□ 0.79
SHOX-204ENST00000554971 DOCK3Q8IZD9 2030 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 GOLGA6L6A8MZA4 724 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 TRPA1O75762 1119 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 ADD1P35611 737 aaKnown RBP19.95■□□□□ 0.78
SHOX-204ENST00000554971 SLC1A4P43007 532 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 MAP2K1Q02750 393 aaPredicted RBP19.95■□□□□ 0.78
SHOX-204ENST00000554971 CRHR2Q13324 411 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 P2RX7Q99572 595 aaKnown RBP19.95■□□□□ 0.78
SHOX-204ENST00000554971 MYL10Q9BUA6 226 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 TANGO6Q9C0B7 1094 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 ADGRA2Q96PE1 1338 aa19.95■□□□□ 0.78
SHOX-204ENST00000554971 USP17L15C9J2P7 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L13C9JLJ4 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L11C9JVI0 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L18D6R9N7 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L22D6RA61 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L17D6RBQ6 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L19D6RCP7 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L20D6RJB6 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 BMP3P12645 472 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 USP17L24Q0WX57 530 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 BICD2Q8TD16 824 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 PGBD1Q96JS3 809 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 MYH6P13533 1939 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 PEX10O60683 326 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 TAF1CQ15572 869 aaPredicted RBP19.94■□□□□ 0.78
SHOX-204ENST00000554971 OTUD7BQ6GQQ9 843 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 ZNF654Q8IZM8 581 aa19.94■□□□□ 0.78
SHOX-204ENST00000554971 SPDYE16A6NNV3 312 aaPredicted RBP19.93■□□□□ 0.78
SHOX-204ENST00000554971 CA12O43570 354 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 GOLGA8HP0CJ92 632 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 RXRAP19793 462 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 ZNF543Q08ER8 600 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 FRMPD2Q68DX3 1309 aaPredicted RBP19.93■□□□□ 0.78
SHOX-204ENST00000554971 TTBK2Q6IQ55 1244 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 RAB11FIP4Q86YS3 637 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 DCAF4Q8WV16 495 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 CFHR5Q9BXR6 569 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 MRVI1Q9Y6F6 885 aa19.93■□□□□ 0.78
SHOX-204ENST00000554971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHOX-204ENST00000554971 FLOT1O75955 427 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 TBC1D8O95759 1140 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 ALDH1A1P00352 501 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 HERVK_113P62684 666 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 SASS6Q6UVJ0 657 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 TMTC2Q8N394 836 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 STAG2Q8N3U4 1231 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 CPVLQ9H3G5 476 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 MAD2L2Q9UI95 211 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 TMEM232C9JQI7 657 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 DTNBO60941 627 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
SHOX-204ENST00000554971 PABPC4Q13310 644 aaKnown RBP eCLIP19.92■□□□□ 0.78
SHOX-204ENST00000554971 PARK7Q99497 189 aaKnown RBP19.92■□□□□ 0.78
SHOX-204ENST00000554971 TSKSQ9UJT2 592 aa19.92■□□□□ 0.78
SHOX-204ENST00000554971 CASP8AP2Q9UKL3 1982 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 ZSWIM8A7E2V4 1837 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 CCDC69A6NI79 296 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 TLR2O60603 784 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 COG2Q14746 738 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 SLC35G1Q2M3R5 365 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 NFXL1Q6ZNB6 911 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 TXNRD2Q9NNW7 524 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 PNMA3Q9UL41 463 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 PPP1R9AQ9ULJ8 1098 aa19.91■□□□□ 0.78
SHOX-204ENST00000554971 DSG3P32926 999 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 SLC16A2P36021 539 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 CCT2P78371 535 aaKnown RBP19.9■□□□□ 0.78
SHOX-204ENST00000554971 CCDC96Q2M329 555 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 LBX2Q6XYB7 198 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 CATIPQ7Z7H3 387 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 PIBF1Q8WXW3 757 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 ATG4CQ96DT6 458 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 GPCPD1Q9NPB8 672 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 SAGE1Q9NXZ1 904 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 ADAMTS5Q9UNA0 930 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 HPS5Q9UPZ3 1129 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 KLF18A0A0U1RQI7 1052 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 PALM3A6NDB9 673 aaPredicted RBP19.9■□□□□ 0.78
SHOX-204ENST00000554971 DDAH1O94760 285 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 OSBPP22059 807 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 STAT2P52630 851 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 GRM4Q14833 912 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 TPRNQ4KMQ1 711 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 BRAPQ7Z569 592 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 MICU3Q86XE3 530 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 SMCR8Q8TEV9 937 aaPredicted RBP19.9■□□□□ 0.78
SHOX-204ENST00000554971 RTEL1Q9NZ71 1219 aa19.9■□□□□ 0.78
SHOX-204ENST00000554971 PLA2G6O60733 806 aa19.89■□□□□ 0.77
SHOX-204ENST00000554971 NR1I2O75469 434 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms