RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CWC27Q6UX04 472 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 MSL3Q8N5Y2 521 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 APPBP2Q92624 585 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 TSEN34Q9BSV6 310 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 NYAP2Q9P242 653 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 SYNGAP1Q96PV0 1343 aa16.58■□□□□ 0.24
SPTLC2-202ENST00000554365 RAD50Q92878 1312 aa16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 MOXD2PA6NHM9 499 aa16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 ANKRD33Q7Z3H0 272 aa16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 ZNF589Q86UQ0 364 aaPredicted RBP16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 RAVER2Q9HCJ3 691 aaKnown RBP16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
SPTLC2-202ENST00000554365 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 TDO2P48775 406 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 GIMAP6Q6P9H5 292 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 ANKRD35Q8N283 1001 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 KLHDC9Q8NEP7 349 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 GREB1LQ9C091 1923 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-202ENST00000554365 TMEM265A0A087WTH1 108 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 DUSP11O75319 330 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 PRDM1O75626 825 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 APPP05067 770 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 EPB41L4AQ9HCS5 686 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 EYSQ5T1H1 3165 aa16.55■□□□□ 0.24
SPTLC2-202ENST00000554365 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 ATP2A1O14983 1001 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 GPAA1O43292 621 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 TIMP1P01033 207 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 DNAJB2P25686 324 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 CCSAPQ6IQ19 270 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 ZNF467Q7Z7K2 595 aaPredicted RBP16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 SLC38A10Q9HBR0 1119 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 FBXO40Q9UH90 709 aa16.54■□□□□ 0.24
SPTLC2-202ENST00000554365 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 CCDC171Q6TFL3 1326 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 CDH23Q9H251 3354 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 FOXP2O15409 715 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 ADCY6O43306 1168 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 ASGR1P07306 291 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 GNAT2P19087 354 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 PCSK9Q8NBP7 692 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 ABHD16BQ9H3Z7 469 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 HOMER2Q9NSB8 354 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
SPTLC2-202ENST00000554365 ELP1O95163 1332 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 TTLL1O95922 423 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 CST5P28325 142 aaPredicted RBP16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 GNASQ5JWF2 1037 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 MFSD5Q6N075 450 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 ARMCX2Q7L311 632 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 MKL1Q969V6 931 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 FGD4Q96M96 766 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 TBX21Q9UL17 535 aa16.52■□□□□ 0.24
SPTLC2-202ENST00000554365 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 BMP3P12645 472 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 CDK7P50613 346 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 GJA9P57773 515 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 PTH1RQ03431 593 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 PPIGQ13427 754 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
SPTLC2-202ENST00000554365 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms