RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 GATA6Q92908 595 aa7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 CCDC113Q9H0I3 377 aa7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 MSRB2Q9Y3D2 182 aa7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 MYOM3Q5VTT5 1437 aa7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 ZNF335Q9H4Z2 1342 aaPredicted RBP7.01□□□□□ -1.29
MTHFD1-206ENST00000554353 CAMSAP2Q08AD1 1489 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 IQSEC2Q5JU85 1478 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 CCDC141Q6ZP82 1450 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 PDPK1O15530 556 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 NFIAQ12857 509 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 IFRD2Q12894 506 aaPredicted RBP7□□□□□ -1.29
MTHFD1-206ENST00000554353 CYP27C1Q4G0S4 372 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
MTHFD1-206ENST00000554353 DUSP27Q5VZP5 1158 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 GIMAP6Q6P9H5 292 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 ZNF765Q7L2R6 523 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 RNF141Q8WVD5 230 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 CNTNAP4Q9C0A0 1308 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
MTHFD1-206ENST00000554353 PLA2R1Q13018 1463 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 TCOF1Q13428 1488 aaKnown RBP6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 PTPN23Q9H3S7 1636 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 WDR64B1ANS9 1081 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 LRRN2O75325 713 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 F13BP05160 661 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 FURINP09958 794 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 TSPY4P0CV99 314 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 TSPY10P0CW01 314 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 SFRP5Q5T4F7 317 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 DCAF15Q66K64 600 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 HEATR6Q6AI08 1181 aaKnown RBP6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 EEPD1Q7L9B9 569 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 HAUS7Q99871 368 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 DBNDD2Q9BQY9 259 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 ASPNQ9BXN1 380 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 CWC22Q9HCG8 908 aaKnown RBP6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 GTF2IRD1Q9UHL9 959 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 ARHGEF5Q12774 1597 aa6.99□□□□□ -1.29
MTHFD1-206ENST00000554353 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 CYP27A1Q02318 531 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 AUHQ13825 339 aaKnown RBP6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 MTERF2Q49AM1 385 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 ARHGAP27Q6ZUM4 889 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 LRP10Q7Z4F1 713 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 PPP1R14AQ96A00 147 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 FGD4Q96M96 766 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 HEXIM2Q96MH2 286 aaKnown RBP6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 DNAJC7Q99615 494 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 OSBPL1AQ9BXW6 950 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 PFDN2Q9UHV9 154 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 FBXL21Q9UKT6 434 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 PZPP20742 1482 aa6.98□□□□□ -1.29
MTHFD1-206ENST00000554353 TNRQ92752 1358 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 KDM5DQ9BY66 1539 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 HFM1A2PYH4 1435 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 SUSD5O60279 629 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 EPHX1P07099 455 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 CENPBP07199 599 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 FSTP19883 344 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 ITGB7P26010 798 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 RASGRF1Q13972 1273 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 SPATA31D1Q6ZQQ2 1576 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 FAM214BQ7L5A3 538 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 ADAT2Q7Z6V5 191 aaKnown RBP6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 C7orf61Q8IZ16 206 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 SHKBP1Q8TBC3 707 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
MTHFD1-206ENST00000554353 GCC2Q8IWJ2 1684 aa6.96□□□□□ -1.29
MTHFD1-206ENST00000554353 NEURL4Q96JN8 1562 aa6.96□□□□□ -1.29
MTHFD1-206ENST00000554353 NAIPQ13075 1403 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 ANKRD34BA5PLL1 514 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 GNAT3A8MTJ3 354 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 PRR33A8MZF0 331 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 H2AFB1P0C5Y9 115 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 H2AFB2P0C5Z0 115 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 NAT2P11245 290 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 TCEAL1Q15170 157 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 NBPF9Q3BBW0 867 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 SV2CQ496J9 727 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 SPATC1Q76KD6 591 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 THEMISQ8N1K5 641 aaPredicted RBP6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 FAM181AQ8N9Y4 354 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 SIN3AQ96ST3 1273 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 PSMD1Q99460 953 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 APBA2Q99767 749 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 GBP3Q9H0R5 595 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 KCNH3Q9ULD8 1083 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 ZNF451Q9Y4E5 1061 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 PCDHB12Q9Y5F1 795 aa6.96□□□□□ -1.3
MTHFD1-206ENST00000554353 FAM135AQ9P2D6 1515 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms