RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CHMP4CQ96CF2 233 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 INCENPQ9NQS7 918 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 IL17RBQ9NRM6 502 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 POTEB2H3BUK9 544 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 NMT2O60551 498 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 ACLYP53396 1101 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 KCTD1Q719H9 257 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 SPC25Q9HBM1 224 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 MTMR10Q9NXD2 777 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 SYNRGQ9UMZ2 1314 aa22.19■■□□□ 1.14
CPSF2-203ENST00000554290 TRIM43BA6NCK2 446 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 MOXD2PA6NHM9 499 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 CLTBP09497 229 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 FGRP09769 529 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 ARMCX2Q7L311 632 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 SH3RF1Q7Z6J0 888 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 SLC17A8Q8NDX2 589 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 TRIM43Q96BQ3 446 aaPredicted RBP22.18■■□□□ 1.14
CPSF2-203ENST00000554290 FAM227BQ96M60 508 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 AGBL1Q96MI9 1066 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 RWDD1Q9H446 243 aaPredicted RBP22.18■■□□□ 1.14
CPSF2-203ENST00000554290 STARD7Q9NQZ5 370 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 RNF146Q9NTX7 359 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 SMCHD1A6NHR9 2005 aa22.18■■□□□ 1.14
CPSF2-203ENST00000554290 ZNF536O15090 1300 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 TRIM6-TRIM34B2RNG4 842 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 FGAP02671 866 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 CNTN2Q02246 1040 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 KCNA10Q16322 511 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 CCDC144CPQ8IYA2 1237 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 PCSK9Q8NBP7 692 aaKnown RBP22.17■■□□□ 1.14
CPSF2-203ENST00000554290 KLHDC9Q8NEP7 349 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 FGD4Q96M96 766 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 TRERF1Q96PN7 1200 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 LNPKQ9C0E8 428 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 PRR12Q9ULL5 1215 aa22.17■■□□□ 1.14
CPSF2-203ENST00000554290 A0A0D9SFI3 127 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 PQBP1O60828 265 aaKnown RBP22.16■■□□□ 1.14
CPSF2-203ENST00000554290 ALAS1P13196 640 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 NOVP48745 357 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 SHHQ15465 462 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 FAM109BQ6ICB4 259 aaPredicted RBP22.16■■□□□ 1.14
CPSF2-203ENST00000554290 FAM133AQ8N9E0 248 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 DCAF4Q8WV16 495 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 TOX2Q96NM4 488 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 A1CFQ9NQ94 594 aaKnown RBP22.16■■□□□ 1.14
CPSF2-203ENST00000554290 MTMR7Q9Y216 660 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 STXBP5LQ9Y2K9 1186 aa22.16■■□□□ 1.14
CPSF2-203ENST00000554290 ASB14A6NK59 587 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 DCDC2CA8MYV0 355 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 C6orf222P0C671 652 aaPredicted RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 HSPD1P10809 573 aaKnown RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 CST5P28325 142 aaPredicted RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 MFAP1P55081 439 aaKnown RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 NMIQ13287 307 aaPredicted RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 CCDC96Q2M329 555 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 RRP12Q5JTH9 1297 aaKnown RBP22.15■■□□□ 1.14
CPSF2-203ENST00000554290 CCDC174Q6PII3 467 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 ANKRD33Q7Z3H0 272 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 SMC5Q8IY18 1101 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 RILPL2Q969X0 211 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 GLT1D1Q96MS3 346 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 TMEM39AQ9NV64 488 aa22.15■■□□□ 1.14
CPSF2-203ENST00000554290 ELP1O95163 1332 aa22.14■■□□□ 1.14
CPSF2-203ENST00000554290 ZMYM6O95789 1325 aa22.14■■□□□ 1.14
CPSF2-203ENST00000554290 KIAA0355O15063 1070 aa22.14■■□□□ 1.13
CPSF2-203ENST00000554290 RAG1P15918 1043 aa22.14■■□□□ 1.13
CPSF2-203ENST00000554290 GJA9P57773 515 aa22.14■■□□□ 1.13
CPSF2-203ENST00000554290 CCSAPQ6IQ19 270 aaPredicted RBP22.14■■□□□ 1.13
CPSF2-203ENST00000554290 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
CPSF2-203ENST00000554290 UPF3AQ9H1J1 476 aaKnown RBP22.14■■□□□ 1.13
CPSF2-203ENST00000554290 TCP11L1Q9NUJ3 509 aa22.14■■□□□ 1.13
CPSF2-203ENST00000554290 LAMA3Q16787 3333 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 LTBP2Q14767 1821 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 TOP1P11387 765 aaKnown RBP22.13■■□□□ 1.13
CPSF2-203ENST00000554290 SNAP25P60880 206 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 GNASQ5JWF2 1037 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 VTI1AQ96AJ9 217 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 CCPG1Q9ULG6 757 aa22.13■■□□□ 1.13
CPSF2-203ENST00000554290 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 MYADML2A6NDP7 307 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 SOWAHBA6NEL2 793 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 ICAM1P05362 532 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 ASGR1P07306 291 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 PCP11498 1178 aaKnown RBP22.12■■□□□ 1.13
CPSF2-203ENST00000554290 TNFAIP2Q03169 654 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 MFSD6Q6ZSS7 791 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 NOL8Q76FK4 1167 aaKnown RBP22.12■■□□□ 1.13
CPSF2-203ENST00000554290 ZNF589Q86UQ0 364 aaPredicted RBP22.12■■□□□ 1.13
CPSF2-203ENST00000554290 TMEM47Q9BQJ4 181 aa22.12■■□□□ 1.13
CPSF2-203ENST00000554290 MROH7Q68CQ1 1323 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 ADCY6O43306 1168 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 FAAP100Q0VG06 881 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 MUM1L1Q5H9M0 696 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 BTNL9Q6UXG8 535 aa22.11■■□□□ 1.13
CPSF2-203ENST00000554290 RASGRP2Q7LDG7 609 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms