RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 SPATC1LQ9H0A9 340 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 SLKQ9H2G2 1235 aaPredicted RBP21.41■■□□□ 1.02
PSEN1-210ENST00000554131 MYH6P13533 1939 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 MGAMO43451 1857 aa21.41■■□□□ 1.02
PSEN1-210ENST00000554131 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 GPR25O00155 361 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 ZBED4O75132 1171 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 CTDNEP1O95476 244 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 TAL1P17542 331 aaPredicted RBP21.4■■□□□ 1.02
PSEN1-210ENST00000554131 CTGFP29279 349 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 CDC37Q16543 378 aaPredicted RBP21.4■■□□□ 1.02
PSEN1-210ENST00000554131 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 GPRC5AQ8NFJ5 357 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 PIGSQ96S52 555 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 BEGAINQ9BUH8 593 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 RAVER2Q9HCJ3 691 aaKnown RBP21.4■■□□□ 1.02
PSEN1-210ENST00000554131 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 RIPK3Q9Y572 518 aa21.4■■□□□ 1.02
PSEN1-210ENST00000554131 FOXN1O15353 648 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 ICAM1P05362 532 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 HSPA1AP0DMV8 641 aaKnown RBP21.39■■□□□ 1.01
PSEN1-210ENST00000554131 HSPA1BP0DMV9 641 aaKnown RBP21.39■■□□□ 1.01
PSEN1-210ENST00000554131 IFNAR1P17181 557 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 RIOX2Q8IUF8 465 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 CCDC82Q8N4S0 544 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-210ENST00000554131 AGBL1Q96MI9 1066 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 MOV10L1Q9BXT6 1211 aaKnown RBP21.39■■□□□ 1.01
PSEN1-210ENST00000554131 PORCNQ9H237 461 aa21.39■■□□□ 1.01
PSEN1-210ENST00000554131 ZBTB5O15062 677 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 STAT3P40763 770 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 MCM2P49736 904 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 CCDC174Q6PII3 467 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 CPXCR1Q8N123 301 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 SNX21Q969T3 373 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
PSEN1-210ENST00000554131 PLXNB2O15031 1838 aa21.37■■□□□ 1.01
PSEN1-210ENST00000554131 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
PSEN1-210ENST00000554131 SNRNP48Q6IEG0 339 aaKnown RBP21.37■■□□□ 1.01
PSEN1-210ENST00000554131 ZNF296Q8WUU4 475 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-210ENST00000554131 PHKBQ93100 1093 aa21.37■■□□□ 1.01
PSEN1-210ENST00000554131 TMX3Q96JJ7 454 aa21.37■■□□□ 1.01
PSEN1-210ENST00000554131 SH2B1Q9NRF2 756 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-210ENST00000554131 PNMA6FA0A0J9YX94 578 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 hCG_1642624A0A1W2PR95 340 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 DHX16O60231 1041 aaKnown RBP21.36■■□□□ 1.01
PSEN1-210ENST00000554131 DTNBO60941 627 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 LACTBP83111 547 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-210ENST00000554131 SP3Q02447 781 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 PKN1Q16512 942 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 HOMER1Q86YM7 354 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 SHCBP1Q8NEM2 672 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 ARHGAP39Q9C0H5 1083 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 EFCC1Q9HA90 598 aa21.36■■□□□ 1.01
PSEN1-210ENST00000554131 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 PRPF3O43395 683 aaKnown RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 PPFIA3O75145 1194 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 ERCC3P19447 782 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 PLS1Q14651 629 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 NSUN7Q8NE18 718 aaKnown RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 RRP36Q96EU6 259 aaKnown RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 RNF26Q9BY78 433 aaPredicted RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 CCPG1Q9ULG6 757 aa21.35■■□□□ 1.01
PSEN1-210ENST00000554131 V9GY48 417 aaPredicted RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 RBBP6Q7Z6E9 1792 aaKnown RBP21.35■■□□□ 1.01
PSEN1-210ENST00000554131 FMNL1O95466 1100 aaPredicted RBP21.34■■□□□ 1.01
PSEN1-210ENST00000554131 SLC25A27O95847 323 aa21.34■■□□□ 1.01
PSEN1-210ENST00000554131 FBXO11Q86XK2 927 aa21.34■■□□□ 1.01
PSEN1-210ENST00000554131 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
PSEN1-210ENST00000554131 CLEC4DQ8WXI8 215 aa21.34■■□□□ 1.01
PSEN1-210ENST00000554131 OPLAHO14841 1288 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 FKTNO75072 461 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 FDPSP14324 419 aaKnown RBP21.33■■□□□ 1.01
PSEN1-210ENST00000554131 CCNA1P78396 465 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 MUM1L1Q5H9M0 696 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 SHISA4Q96DD7 197 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 TRIM47Q96LD4 638 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 AMNQ9BXJ7 453 aa21.33■■□□□ 1.01
PSEN1-210ENST00000554131 CTDP1Q9Y5B0 961 aaPredicted RBP21.33■■□□□ 1.01
PSEN1-210ENST00000554131 LCTP09848 1927 aa21.33■■□□□ 1
PSEN1-210ENST00000554131 STK36Q9NRP7 1315 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 CPLX1O14810 134 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 JAK2O60674 1132 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 CUL4AQ13619 759 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 PFKFB3Q16875 520 aaPredicted RBP21.32■■□□□ 1
PSEN1-210ENST00000554131 TKFCQ3LXA3 575 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 USH1GQ495M9 461 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 GPR142Q7Z601 462 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 SMARCC2Q8TAQ2 1214 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 CD99L2Q8TCZ2 262 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 SLC26A6Q9BXS9 759 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 MROH8Q9H579 483 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 RNF146Q9NTX7 359 aa21.32■■□□□ 1
PSEN1-210ENST00000554131 DOCK3Q8IZD9 2030 aa21.31■■□□□ 1
PSEN1-210ENST00000554131 ALAS1P13196 640 aa21.31■■□□□ 1
PSEN1-210ENST00000554131 MAPK4P31152 587 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms