RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ATAD5Q96QE3 1844 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 A0A1W2PRG0 241 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 SMIM22K7EJ46 135 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 TK2O00142 265 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 HOXA2O43364 376 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-209ENST00000553855 WDR78Q5VTH9 848 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 CLEC10AQ8IUN9 316 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 SPICE1Q8N0Z3 855 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 MB21D1Q8N884 522 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 STAG1Q8WVM7 1258 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 CEP95Q96GE4 821 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 KRT23Q9C075 422 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-209ENST00000553855 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.82□□□□□ -0.84
PSEN1-209ENST00000553855 RABGAP1Q9Y3P9 1069 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 LAMB1P07942 1786 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
PSEN1-209ENST00000553855 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 ADGRA2Q96PE1 1338 aa9.82□□□□□ -0.84
PSEN1-209ENST00000553855 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 F5H6K3 240 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 CDC45O75419 566 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 MAPK4P31152 587 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 ERVK-24P63145 666 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 KLRC3Q07444 240 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 SLC9C1Q4G0N8 1177 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 SLFN13Q68D06 897 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 RALYLQ86SE5 291 aaKnown RBP9.81□□□□□ -0.84
PSEN1-209ENST00000553855 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 MORF4L1Q9UBU8 362 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 SRRDQ9UH36 339 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 IVNS1ABPQ9Y6Y0 642 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 CASP8AP2Q9UKL3 1982 aa9.81□□□□□ -0.84
PSEN1-209ENST00000553855 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 ERICH2A1L162 156 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 FOXP2O15409 715 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 SGSM2O43147 1006 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 ZBED4O75132 1171 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 FDX1P10109 184 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 SLC1A4P43007 532 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 UBXN2AP68543 259 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 PLS1Q14651 629 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 LRRC47Q8N1G4 583 aaKnown RBP9.8□□□□□ -0.84
PSEN1-209ENST00000553855 GMCL1P1Q8NEA9 526 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 CHURC1Q8WUH1 139 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 MKL1Q969V6 931 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 CALR3Q96L12 384 aaKnown RBP9.8□□□□□ -0.84
PSEN1-209ENST00000553855 TTC14Q96N46 770 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 UBAC1Q9BSL1 405 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 TRAIPQ9BWF2 469 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 ARHGAP39Q9C0H5 1083 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 FEM1BQ9UK73 627 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 MTMR7Q9Y216 660 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
PSEN1-209ENST00000553855 LOC285556D6RIA3 1793 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 NDUFB10O96000 172 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 FGRP09769 529 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 TOP1P11387 765 aaKnown RBP9.79□□□□□ -0.84
PSEN1-209ENST00000553855 BMP3P12645 472 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 COPB2P35606 906 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 SART3Q15020 963 aaKnown RBP9.79□□□□□ -0.84
PSEN1-209ENST00000553855 CCDC96Q2M329 555 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 LBX2Q6XYB7 198 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 PLEKHH3Q7Z736 793 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 FAM160B2Q86V87 743 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 SIAH1Q8IUQ4 282 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 TBC1D10CQ8IV04 446 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 SOCS4Q8WXH5 440 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 ESYT1Q9BSJ8 1104 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 KAT14Q9H8E8 782 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 INCENPQ9NQS7 918 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 TCP11L1Q9NUJ3 509 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 RBPJLQ9UBG7 517 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 PTCH2Q9Y6C5 1203 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 MYH8P13535 1937 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 PHIPQ8WWQ0 1821 aa9.79□□□□□ -0.84
PSEN1-209ENST00000553855 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
PSEN1-209ENST00000553855 SLC25A27O95847 323 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 GRK4P32298 578 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 FLT3LGP49771 235 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 STAT2P52630 851 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 PRKCZQ05513 592 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 TRMT44Q8IYL2 757 aaKnown RBP9.78□□□□□ -0.84
PSEN1-209ENST00000553855 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
PSEN1-209ENST00000553855 NCOA7Q8NI08 942 aa9.78□□□□□ -0.84
PSEN1-209ENST00000553855 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms