RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 C16orf86Q6ZW13 317 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
PRKCH-208ENST00000553846 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 SH2D4AQ9H788 454 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
PRKCH-208ENST00000553846 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
PRKCH-208ENST00000553846 C5orf42Q9H799 3197 aa10.99□□□□□ -0.65
PRKCH-208ENST00000553846 CYP2D7A0A087X1C5 515 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.98□□□□□ -0.65
PRKCH-208ENST00000553846 RFXAPO00287 272 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 PRKAB2O43741 272 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 B4GALT4O60513 344 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 LPXNO60711 386 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 SURF6O75683 361 aaKnown RBP10.98□□□□□ -0.65
PRKCH-208ENST00000553846 BCAR3O75815 825 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 PTGS1P23219 599 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 CDK8P49336 464 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 TET1Q8NFU7 2136 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 CCDC17Q96LX7 622 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 ABHD16BQ9H3Z7 469 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
PRKCH-208ENST00000553846 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 PI4K2BG5E9Z4 385 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
PRKCH-208ENST00000553846 CA3P07451 260 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 BEX3Q00994 111 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 TTLL4Q14679 1199 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 SLC9C2Q5TAH2 1124 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
PRKCH-208ENST00000553846 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 ARMCX2Q7L311 632 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 TMEM57Q8N5G2 664 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 NUP88Q99567 741 aaPredicted RBP10.97□□□□□ -0.65
PRKCH-208ENST00000553846 TRPV6Q9H1D0 765 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
PRKCH-208ENST00000553846 MTIF3Q9H2K0 278 aaKnown RBP10.97□□□□□ -0.65
PRKCH-208ENST00000553846 KANSL2Q9H9L4 492 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 COG5Q9UP83 839 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 SLC4A7Q9Y6M7 1214 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 MYH7P12883 1935 aa10.97□□□□□ -0.65
PRKCH-208ENST00000553846 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 ATP2A2P16615 1042 aaKnown RBP10.96□□□□□ -0.65
PRKCH-208ENST00000553846 CCL23P55773 120 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 TAP1Q03518 808 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
PRKCH-208ENST00000553846 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 MICALL1Q8N3F8 863 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 C1orf115Q9H7X2 142 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 SLC38A10Q9HBR0 1119 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 ATP8A2Q9NTI2 1148 aa10.96□□□□□ -0.65
PRKCH-208ENST00000553846 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 APBB1O00213 710 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 CABYRO75952 493 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 NDUFB10O96000 172 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 CHGBP05060 677 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
PRKCH-208ENST00000553846 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 TMEM63BQ5T3F8 832 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRKCH-208ENST00000553846 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 SCLYQ96I15 445 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 MYO15AQ9UKN7 3530 aa10.95□□□□□ -0.66
PRKCH-208ENST00000553846 SOWAHBA6NEL2 793 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 USP17L12C9JPN9 530 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 USP17L21D6R901 530 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 MBD4O95243 580 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 PFKMP08237 780 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 SMPD1P17405 629 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 ADD2P35612 726 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 GRB10Q13322 594 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
PRKCH-208ENST00000553846 TLK2Q86UE8 772 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 AACSQ86V21 672 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 ALYREFQ86V81 257 aaKnown RBP10.94□□□□□ -0.66
PRKCH-208ENST00000553846 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
PRKCH-208ENST00000553846 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
PRKCH-208ENST00000553846 DDX49Q9Y6V7 483 aaKnown RBP10.94□□□□□ -0.66
PRKCH-208ENST00000553846 ZNF536O15090 1300 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 F5H6K3 240 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 IPO8O15397 1037 aaKnown RBP10.93□□□□□ -0.66
PRKCH-208ENST00000553846 RASA1P20936 1047 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 OAZ1P54368 228 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 PSMC6P62333 389 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 KLRC3Q07444 240 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-208ENST00000553846 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms