RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 H7C1D1 291 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 JAK2O60674 1132 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 SLC8A1P32418 973 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 GMPSP49915 693 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 NDUFA8P51970 172 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 SEMA3FQ13275 785 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 DACT2Q5SW24 774 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 AACSQ86V21 672 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 ELOA2Q8IYF1 753 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 NAPGQ99747 312 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 ACTR5Q9H9F9 607 aaPredicted RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 ECHDC1Q9NTX5 307 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
CFAP54-204ENST00000553778 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 MYO3BQ8WXR4 1341 aa11.24□□□□□ -0.61
CFAP54-204ENST00000553778 CLSTN1O94985 981 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 RHOXF2BP0C7M4 288 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 NEFHP12036 1026 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 FECHP22830 423 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 PHKA1P46020 1223 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 SCNN1DP51172 638 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 IFFO1Q0D2I5 559 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 TRAF1Q13077 416 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 EMC10Q5UCC4 262 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 PLCD4Q9BRC7 762 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 GPRC5DQ9NZD1 345 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 POTECB2RU33 542 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 MYO1FO00160 1098 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 SEMA3EO15041 775 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 CDR1P51861 262 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC40Q4G0X9 1142 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
CFAP54-204ENST00000553778 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 CD248Q9HCU0 757 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
CFAP54-204ENST00000553778 LAMA4Q16363 1823 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 FAM237AA0A1B0GTK4 181 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 AGPSO00116 658 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
CFAP54-204ENST00000553778 OPA1O60313 960 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 ZNF202O95125 648 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 CMA1P23946 247 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 EPHX2P34913 555 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 GGCXP38435 758 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 EPS15P42566 896 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 AMPD2Q01433 879 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 SLMAPQ14BN4 828 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 MFSD14BQ5SR56 506 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
CFAP54-204ENST00000553778 WDR66Q8TBY9 1149 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 CCDC51Q96ER9 411 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 HDAC9Q9UKV0 1011 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 ZNF609O15014 1411 aa11.22□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA6L7A0A1B0GV03 622 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 A0A1B0GVL5 298 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 CLNS1AP54105 237 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 GNGT1P63211 74 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 CEBPZQ03701 1054 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 KARSQ15046 597 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 SNCBQ16143 134 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 C3orf20Q8ND61 904 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
CFAP54-204ENST00000553778 CALR3Q96L12 384 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 DBNLQ9UJU6 430 aaKnown RBP11.21□□□□□ -0.61
CFAP54-204ENST00000553778 GOLGA6BA6NDN3 693 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 TMEM232C9JQI7 657 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 NDUFAB1O14561 156 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 DTNBO60941 627 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.62
CFAP54-204ENST00000553778 ZNF18P17022 549 aa11.21□□□□□ -0.62
CFAP54-204ENST00000553778 RBBP5Q15291 538 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms