RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 CFAP157Q5JU67 520 aa16.93■□□□□ 0.3
ARHGEF40-202ENST00000553709 FYB2Q5VWT5 728 aa16.93■□□□□ 0.3
ARHGEF40-202ENST00000553709 FRMPD2Q68DX3 1309 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-202ENST00000553709 GBP6Q6ZN66 633 aa16.93■□□□□ 0.3
ARHGEF40-202ENST00000553709 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 LINC00301Q8NCQ3 95 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 CABS1Q96KC9 395 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 PPP1R13BQ96KQ4 1090 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 RAB17Q9H0T7 212 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 ARMCX3Q9UH62 379 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 LARGE1O95461 756 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 COPB1P53618 953 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 MRRFQ96E11 262 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 SLIT1O75093 1534 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 ARHGAP25P42331 645 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 KRT71Q3SY84 523 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 DCUN1D2Q6PH85 259 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 LARGE2Q8N3Y3 721 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 EPN1Q9Y6I3 576 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 E7EVH7 732 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 MYO1AQ9UBC5 1043 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 USTQ9Y2C2 406 aa16.92■□□□□ 0.3
ARHGEF40-202ENST00000553709 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 ADD2P35612 726 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 LONRF2Q1L5Z9 754 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 SUPT20HQ8NEM7 779 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 KIFC2Q96AC6 838 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 PLCB1Q9NQ66 1216 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 PRR16Q569H4 304 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 RSRC1Q96IZ7 334 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 SLC39A2Q9NP94 309 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 NDC80O14777 642 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 TTC16Q8NEE8 873 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 MAGEF1Q9HAY2 307 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 ATP2B4P23634 1241 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 CHURC1Q8WUH1 139 aa16.91■□□□□ 0.3
ARHGEF40-202ENST00000553709 BTDP43251 543 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 PPFIBP2Q8ND30 876 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 MAIP1Q8WWC4 291 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 IWS1Q96ST2 819 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 PLEKHA4Q9H4M7 779 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 KCNK3O14649 394 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 CASP14P31944 242 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 SLC8A3P57103 927 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 DDX25Q9UHL0 483 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 IQSEC2Q5JU85 1478 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 CYP2J2P51589 502 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 CACTINQ8WUQ7 758 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 SASH1O94885 1247 aa16.9■□□□□ 0.3
ARHGEF40-202ENST00000553709 NOP56O00567 594 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 ATP11AP98196 1134 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM26FQ5R3K3 315 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPP1R21Q6ZMI0 780 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 STMN2Q93045 179 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 OSBP2Q969R2 916 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 SEMA3EO15041 775 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 GUCY2FP51841 1108 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 MIER3Q7Z3K6 550 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 BUB1O43683 1085 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 ABCB4P21439 1286 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 RESTQ13127 1097 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 LAD1O00515 517 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 CYP27B1O15528 508 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 GAS8O95995 478 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 ZSCAN26Q16670 478 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 CUEDC2Q9H467 287 aa16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 FEZ2Q9UHY8 353 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF40-202ENST00000553709 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 ZNF804BA4D1E1 1349 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 PUS7LQ9H0K6 701 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
ARHGEF40-202ENST00000553709 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms