RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 LCORLQ8N3X6 602 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD8-205ENST00000553651 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.54
CHD8-205ENST00000553651 TRPV6Q9H1D0 765 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 B4GALT4O60513 344 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 LPXNO60711 386 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 BCAR3O75815 825 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 CA3P07451 260 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 ATP2A2P16615 1042 aaKnown RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 PTGS1P23219 599 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 CDK8P49336 464 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 CXCL17Q6UXB2 119 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 ARMCX2Q7L311 632 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 TEX13BQ9BXU2 312 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
CHD8-205ENST00000553651 SCN5AQ14524 2016 aa11.64□□□□□ -0.55
CHD8-205ENST00000553651 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 PRKAB2O43741 272 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 TAP1Q03518 808 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 ITGA7Q13683 1181 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 SPRED2Q7Z698 418 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 HLA-CQ95604 372 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 SCLYQ96I15 445 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
CHD8-205ENST00000553651 CERS4Q9HA82 394 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 SPC25Q9HBM1 224 aa11.63□□□□□ -0.55
CHD8-205ENST00000553651 ZNF532Q9HCE3 1301 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
CHD8-205ENST00000553651 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
CHD8-205ENST00000553651 MRE11P49959 708 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 OS9Q13438 667 aaPredicted RBP11.62□□□□□ -0.55
CHD8-205ENST00000553651 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 CCDC144CPQ8IYA2 1237 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 RPUSD2Q8IZ73 545 aaKnown RBP11.62□□□□□ -0.55
CHD8-205ENST00000553651 SLF1Q9BQI6 1058 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 TET1Q8NFU7 2136 aa11.62□□□□□ -0.55
CHD8-205ENST00000553651 TRIOO75962 3097 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 PTPRSQ13332 1948 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 ZBBXA8MT70 800 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 PRR33A8MZF0 331 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 CABYRO75952 493 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 CNTN2Q02246 1040 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 GRB10Q13322 594 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 TMEM63BQ5T3F8 832 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 SNX27Q96L92 541 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 ARMT1Q9H993 441 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
CHD8-205ENST00000553651 PFKMP08237 780 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 PSMC6P62333 389 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 FSCN1Q16658 493 aaKnown RBP11.6□□□□□ -0.55
CHD8-205ENST00000553651 TLK2Q86UE8 772 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 TMEM57Q8N5G2 664 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 ARNTL2Q8WYA1 636 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
CHD8-205ENST00000553651 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 RAVER2Q9HCJ3 691 aaKnown RBP11.6□□□□□ -0.55
CHD8-205ENST00000553651 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
CHD8-205ENST00000553651 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
CHD8-205ENST00000553651 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 USP17L21D6R901 530 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 NDUFB10O96000 172 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 CYP2C9P11712 490 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 SMPD1P17405 629 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 NHLH1Q02575 133 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
CHD8-205ENST00000553651 TAPT1Q6NXT6 567 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 FAM178BQ8IXR5 827 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
CHD8-205ENST00000553651 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
CHD8-205ENST00000553651 LCTP09848 1927 aa11.58□□□□□ -0.55
CHD8-205ENST00000553651 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.58□□□□□ -0.56
CHD8-205ENST00000553651 F5H6K3 240 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 MBD4O95243 580 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 CHGBP05060 677 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 KLRC3Q07444 240 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 DEFB128Q7Z7B8 93 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 AACSQ86V21 672 aa11.58□□□□□ -0.56
CHD8-205ENST00000553651 HERC6Q8IVU3 1022 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms