RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 TPM4P67936 248 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 TMPRSS15P98073 1019 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 PICALMQ13492 652 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 DBN1Q16643 649 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 TSGA10IPQ3SY00 556 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 C4orf46Q504U0 113 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 ARHGAP29Q52LW3 1261 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 HHATQ5VTY9 493 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 LEKR1Q6ZMV7 388 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 ABTB2Q8N961 1025 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 NGDNQ8NEJ9 315 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 SSH3Q8TE77 659 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 ANKRD7Q92527 254 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 APPBP2Q92624 585 aa4.58□□□□□ -1.68
RDH11-204ENST00000553578 TRIM6Q9C030 488 aaPredicted RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 GNEQ9Y223 722 aaKnown RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 ZNF646O15015 1829 aaPredicted RBP4.58□□□□□ -1.68
RDH11-204ENST00000553578 LTBP1Q14766 1721 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 RASSF10A6NK89 507 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 POTECB2RU33 542 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 POLR3DP05423 398 aaPredicted RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 NF2P35240 595 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ADCY2Q08462 1091 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ORC1Q13415 861 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 CAVIN1Q6NZI2 390 aaKnown RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 CEP85Q6P2H3 762 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 GK5Q6ZS86 529 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 C14orf80Q86SX3 495 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 SRLQ86TD4 932 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 NLGN1Q8N2Q7 840 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 SLC16A10Q8TF71 515 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 RTF1Q92541 710 aaKnown RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 TNIP3Q96KP6 325 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ORAI2Q96SN7 254 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 BRINP2Q9C0B6 783 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ANTXR1Q9H6X2 564 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 IP6K2Q9UHH9 426 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 PARP3Q9Y6F1 533 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ASMTLO95671 621 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 MAGEA9P43362 315 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 GNASQ5JWF2 1037 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 TMEM214Q6NUQ4 689 aaKnown RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 LYSMD3Q7Z3D4 306 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 PRICKLE2Q7Z3G6 844 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 C11orf96Q7Z7L8 435 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 PANK1Q8TE04 598 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 C22orf23Q9BZE7 217 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 RANBP17Q9H2T7 1088 aaKnown RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 KIAA1024Q9UPX6 916 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 THRAP3Q9Y2W1 955 aaKnown RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 ESYT3A0FGR9 886 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 SOBPA7XYQ1 873 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 F5H423 210 aaPredicted RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 FAM13AO94988 1023 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 MYL1P05976 194 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 PHKG2P15735 406 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 YY1P25490 414 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 CTSOP43234 321 aaPredicted RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 CLN3Q13286 438 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 RABL6Q3YEC7 729 aaPredicted RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 PLEKHO1Q53GL0 409 aaPredicted RBP4.57□□□□□ -1.68
RDH11-204ENST00000553578 CCDC30Q5VVM6 783 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 BICDL1Q6ZP65 573 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 CCDC186Q7Z3E2 898 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 ANKRD18AQ8IVF6 992 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 TRIML1Q8N9V2 468 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 FLCNQ8NFG4 579 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 CNKSR1Q969H4 720 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 NEUROD6Q96NK8 337 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 DNAJC7Q99615 494 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 VEZTQ9HBM0 779 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 TIAM2Q8IVF5 1701 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 MYH7P12883 1935 aa4.57□□□□□ -1.68
RDH11-204ENST00000553578 SHTN1A0MZ66 631 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 OPLAHO14841 1288 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 MYBL2P10244 700 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 FBLN1P23142 703 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 EIF1AXP47813 144 aaKnown RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 CASP7P55210 303 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 SSRP1Q08945 709 aaKnown RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 E2F5Q15329 346 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 SNAP47Q5SQN1 464 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 AKNAD1Q5T1N1 836 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 BEND3Q5T5X7 828 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 RGL4Q8IZJ4 473 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ZNF654Q8IZM8 581 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 DCAF5Q96JK2 942 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 IQCGQ9H095 443 aaKnown RBP4.56□□□□□ -1.68
RDH11-204ENST00000553578 HCN4Q9Y3Q4 1203 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 DUOX1Q9NRD9 1551 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 MAST2Q6P0Q8 1798 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 DLEC1Q9Y238 1755 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 C4AP0C0L4 1744 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 C4BP0C0L5 1744 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 ANKRD18BA2A2Z9 1011 aa4.56□□□□□ -1.68
RDH11-204ENST00000553578 IPO5O00410 1097 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms