RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 LRRC4CQ9HCJ2 640 aa6.36□□□□□ -1.39
ATXN3-222ENST00000553570 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-222ENST00000553570 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
ATXN3-222ENST00000553570 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
ATXN3-222ENST00000553570 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
ATXN3-222ENST00000553570 PIK3C2AO00443 1686 aa6.36□□□□□ -1.39
ATXN3-222ENST00000553570 USP6P35125 1406 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 KIAA0232Q92628 1395 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-222ENST00000553570 PF4P02776 101 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 FBLN1P23142 703 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
ATXN3-222ENST00000553570 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-222ENST00000553570 PAK2Q13177 524 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 SEPT6Q14141 434 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 COG3Q96JB2 828 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
ATXN3-222ENST00000553570 SNCAIPQ9Y6H5 919 aa6.35□□□□□ -1.39
ATXN3-222ENST00000553570 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 GARTP22102 1010 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 AMPHP49418 695 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-222ENST00000553570 FBXL19Q6PCT2 694 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-222ENST00000553570 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
ATXN3-222ENST00000553570 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATXN3-222ENST00000553570 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 PANK3Q9H999 370 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 FBRSQ9HAH7 460 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-222ENST00000553570 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 MYOM1P52179 1685 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 CAP2P40123 477 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 GJA8P48165 433 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 OXCT1P55809 520 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 LMNB2Q03252 620 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 CAMK2GQ13555 558 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 HDXQ7Z353 690 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 VSIG10LQ86VR7 867 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 SSU72Q9NP77 194 aaKnown RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
ATXN3-222ENST00000553570 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
ATXN3-222ENST00000553570 BRD4O60885 1362 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 FYB1O15117 783 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 GREM1O60565 184 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 EOMESO95936 686 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 VPS72Q15906 364 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 NKG7Q16617 165 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 GOLM1Q8NBJ4 401 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 GPRASP2Q96D09 838 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 PAK6Q9NQU5 681 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 BCL9LQ86UU0 1499 aa6.32□□□□□ -1.4
ATXN3-222ENST00000553570 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ATXN3-222ENST00000553570 COL18A1P39060 1754 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 NRAPQ86VF7 1730 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 LRIG2O94898 1065 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-222ENST00000553570 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
ATXN3-222ENST00000553570 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 NETO1Q8TDF5 533 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 GMLQ99445 158 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
ATXN3-222ENST00000553570 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 ANKRD36BQ8N2N9 1353 aa6.31□□□□□ -1.4
ATXN3-222ENST00000553570 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms