RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 CEP95Q96GE4 821 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 RNF186Q9NXI6 227 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 BIN1O00499 593 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 TRPA1O75762 1119 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 TPM4P67936 248 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 GRIN1Q05586 938 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 PRAMEF18Q5VWM3 479 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 KIAA0825Q8IV33 1275 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 CSRNP2Q9H175 543 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
ABCD4-218ENST00000553486 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
ABCD4-218ENST00000553486 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 CRKP46108 304 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 HDLBPQ00341 1268 aaKnown RBP17.46■□□□□ 0.39
ABCD4-218ENST00000553486 PNOCQ13519 176 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 DGKZQ13574 1117 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 ZNF174Q15697 407 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 CDC42EP5Q6NZY7 148 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 PIK3AP1Q6ZUJ8 805 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 MOB2Q70IA6 237 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
ABCD4-218ENST00000553486 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
ABCD4-218ENST00000553486 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
ABCD4-218ENST00000553486 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
ABCD4-218ENST00000553486 CYTH3O43739 400 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
ABCD4-218ENST00000553486 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-218ENST00000553486 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 GPKOWQ92917 476 aaPredicted RBP eCLIP17.45■□□□□ 0.382e-6■■■■■ 39.1
ABCD4-218ENST00000553486 MRFAP1L1Q96HT8 127 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 ZNF830Q96NB3 372 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-218ENST00000553486 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 HDAC9Q9UKV0 1011 aa17.45■□□□□ 0.38
ABCD4-218ENST00000553486 ATP2C1P98194 919 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 TTC12Q9H892 705 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 PTGDRQ13258 359 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 POSTNQ15063 836 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 WWC2Q6AWC2 1192 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 ZBED3Q96IU2 234 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-218ENST00000553486 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 SERTAD1Q9UHV2 236 aa17.44■□□□□ 0.38
ABCD4-218ENST00000553486 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 STXBP3O00186 592 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 IKBKBO14920 756 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 NF2P35240 595 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-218ENST00000553486 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
ABCD4-218ENST00000553486 PCDHA5Q9Y5H7 936 aa17.43■□□□□ 0.38
ABCD4-218ENST00000553486 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 OFD1O75665 1012 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
ABCD4-218ENST00000553486 USP17L2Q6R6M4 530 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 EHD4Q9H223 541 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
ABCD4-218ENST00000553486 M0R2N6 131 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 WNT7AO00755 349 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 AKR1B1P15121 316 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 RGS19P49795 217 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
ABCD4-218ENST00000553486 ARL6IP4Q66PJ3 421 aaKnown RBP17.42■□□□□ 0.38
ABCD4-218ENST00000553486 PYM1Q9BRP8 204 aaKnown RBP17.42■□□□□ 0.38
ABCD4-218ENST00000553486 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
ABCD4-218ENST00000553486 ACTN4O43707 911 aaKnown RBP17.41■□□□□ 0.38
ABCD4-218ENST00000553486 TTLL1O95922 423 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 MCM7P33993 719 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■□□□□ 10.6
ABCD4-218ENST00000553486 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 ISM2Q6H9L7 571 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 TYW1BQ6NUM6 668 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 CCDC186Q7Z3E2 898 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
ABCD4-218ENST00000553486 PDILTQ8N807 584 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
ABCD4-218ENST00000553486 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 CCDC17Q96LX7 622 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 PCDHA6Q9UN73 950 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 PCDHA8Q9Y5H6 950 aa17.41■□□□□ 0.38
ABCD4-218ENST00000553486 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 USP17L5A8MUK1 530 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 PDHBP11177 359 aa17.4■□□□□ 0.38
ABCD4-218ENST00000553486 GNA11P29992 359 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms