RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 CCDC174Q6PII3 467 aa19.56■□□□□ 0.72
XRCC3-204ENST00000553361 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
XRCC3-204ENST00000553361 ZNF467Q7Z7K2 595 aaPredicted RBP19.56■□□□□ 0.72
XRCC3-204ENST00000553361 BADQ92934 168 aa19.56■□□□□ 0.72
XRCC3-204ENST00000553361 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
XRCC3-204ENST00000553361 A0A1W2PQ45 241 aaPredicted RBP19.55■□□□□ 0.72
XRCC3-204ENST00000553361 A0A1W2PQY0 241 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 TRIM43BA6NCK2 446 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 PQBP1O60828 265 aaKnown RBP19.55■□□□□ 0.72
XRCC3-204ENST00000553361 ADAMTS4O75173 837 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 ALAS1P13196 640 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 C1orf53Q5VUE5 145 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.55■□□□□ 0.725e-6■■■■■ 45.5
XRCC3-204ENST00000553361 TRIM43Q96BQ3 446 aaPredicted RBP19.55■□□□□ 0.72
XRCC3-204ENST00000553361 FGD4Q96M96 766 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 ACAD9Q9H845 621 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
XRCC3-204ENST00000553361 ZNF536O15090 1300 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 SYNRGQ9UMZ2 1314 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 COL11A1P12107 1806 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-204ENST00000553361 PARP14Q460N5 1801 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 ORC4O43929 436 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 PLA2G6O60733 806 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 FGRP09769 529 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 HSPD1P10809 573 aaKnown RBP19.54■□□□□ 0.72
XRCC3-204ENST00000553361 HAND2P61296 217 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-204ENST00000553361 KCNA10Q16322 511 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 CCDC96Q2M329 555 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 ARMCX2Q7L311 632 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 ZNF589Q86UQ0 364 aaPredicted RBP19.54■□□□□ 0.72
XRCC3-204ENST00000553361 CCDC144CPQ8IYA2 1237 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 KLHDC9Q8NEP7 349 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 TSEN34Q9BSV6 310 aaKnown RBP19.54■□□□□ 0.72
XRCC3-204ENST00000553361 ABHD16BQ9H3Z7 469 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
XRCC3-204ENST00000553361 MYADML2A6NDP7 307 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 DUSP11O75319 330 aaKnown RBP19.53■□□□□ 0.72
XRCC3-204ENST00000553361 IGHDP01880 384 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 ACLYP53396 1101 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 AAMPQ13685 434 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 SHHQ15465 462 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 CCDC144BQ3MJ40 725 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 SMC5Q8IY18 1101 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 A1CFQ9NQ94 594 aaKnown RBP19.53■□□□□ 0.72
XRCC3-204ENST00000553361 STARD7Q9NQZ5 370 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 FRMPD3Q5JV73 1810 aa19.53■□□□□ 0.72
XRCC3-204ENST00000553361 COL6A3P12111 3177 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 CLTBP09497 229 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 C6orf222P0C671 652 aaPredicted RBP19.52■□□□□ 0.72
XRCC3-204ENST00000553361 SLC16A2P36021 539 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 FAM133AQ8N9E0 248 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 VTI1AQ96AJ9 217 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 SPC25Q9HBM1 224 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 MTMR10Q9NXD2 777 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 ZNFX1Q9P2E3 1918 aaKnown RBP19.52■□□□□ 0.72
XRCC3-204ENST00000553361 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.72
XRCC3-204ENST00000553361 SOWAHBA6NEL2 793 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 ADCY6O43306 1168 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 TOP1P11387 765 aaKnown RBP19.51■□□□□ 0.71
XRCC3-204ENST00000553361 ITGB8P26012 769 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 NOVP48745 357 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 C9orf50Q5SZB4 431 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 NOL8Q76FK4 1167 aaKnown RBP19.51■□□□□ 0.71
XRCC3-204ENST00000553361 TICAM2Q86XR7 235 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 DCAF4Q8WV16 495 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 TMEM47Q9BQJ4 181 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 GPCPD1Q9NPB8 672 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 TMEM39AQ9NV64 488 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 CCPG1Q9ULG6 757 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 LAMA2P24043 3122 aaKnown RBP19.51■□□□□ 0.71
XRCC3-204ENST00000553361 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
XRCC3-204ENST00000553361 MOXD2PA6NHM9 499 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 RAG1P15918 1043 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 SDSP20132 328 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 MUM1L1Q5H9M0 696 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 GNASQ5JWF2 1037 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 CCSAPQ6IQ19 270 aaPredicted RBP19.5■□□□□ 0.71
XRCC3-204ENST00000553361 MFSD6Q6ZSS7 791 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 TCP11L1Q9NUJ3 509 aa19.5■□□□□ 0.71
XRCC3-204ENST00000553361 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
XRCC3-204ENST00000553361 FRMPD2Q68DX3 1309 aaPredicted RBP19.5■□□□□ 0.71
XRCC3-204ENST00000553361 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.49■□□□□ 0.71
XRCC3-204ENST00000553361 ASB14A6NK59 587 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 DCDC2CA8MYV0 355 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 ASGR1P07306 291 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 NUCB1Q02818 461 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 SYDE2Q5VT97 1194 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 NSMFQ6X4W1 530 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 PCSK9Q8NBP7 692 aaKnown RBP19.49■□□□□ 0.71
XRCC3-204ENST00000553361 GLT1D1Q96MS3 346 aa19.49■□□□□ 0.71
XRCC3-204ENST00000553361 FAM161BQ96MY7 647 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms