RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
ATXN3-218ENST00000553309 CHST7Q9NS84 486 aa7.77□□□□□ -1.17
ATXN3-218ENST00000553309 HPXP02790 462 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 RPL10P27635 214 aaKnown RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 TRHRP34981 398 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 GIPRP48546 466 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 PCBP3P57721 371 aaKnown RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 OXR1Q8N573 874 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-218ENST00000553309 SEC16BQ96JE7 1060 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 FOXP3Q9BZS1 431 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 GFOD1Q9NXC2 390 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 FAM53CQ9NYF3 392 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 PODXL2Q9NZ53 605 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 TCFL5Q9UL49 500 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 EFCAB5A4FU69 1503 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 FHOD3Q2V2M9 1422 aa7.76□□□□□ -1.17
ATXN3-218ENST00000553309 MEIS1O00470 390 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 SYPP08247 313 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 TDRD10Q5VZ19 366 aaKnown RBP7.75□□□□□ -1.17
ATXN3-218ENST00000553309 PDZD8Q8NEN9 1154 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 C19orf44Q9H6X5 657 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATXN3-218ENST00000553309 EBF1Q9UH73 591 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 ZNF281Q9Y2X9 895 aa7.75□□□□□ -1.17
ATXN3-218ENST00000553309 CAMSAP1Q5T5Y3 1602 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 ZMYM4Q5VZL5 1548 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 LRRC10BA6NIK2 292 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-218ENST00000553309 TCF3P15923 654 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 DUSP4Q13115 394 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 AXDND1Q5T1B0 1012 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-218ENST00000553309 MPZL3Q6UWV2 235 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 WAPLQ7Z5K2 1190 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 SPPL2CQ8IUH8 684 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 POU5F2Q8N7G0 328 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 OR6P1Q8NGX9 317 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 FAM86C1Q9NVL1 165 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 ZMYM5Q9UJ78 669 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-218ENST00000553309 LTBP3Q9NS15 1303 aa7.74□□□□□ -1.17
ATXN3-218ENST00000553309 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-218ENST00000553309 TOM1O60784 492 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 MLANAQ16655 118 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 BBS9Q3SYG4 887 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 DCAF15Q66K64 600 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 PPFIBP1Q86W92 1011 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 SMARCC1Q92922 1105 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-218ENST00000553309 SP110Q9HB58 689 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 HECW1Q76N89 1606 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 ATP10BO94823 1461 aa7.73□□□□□ -1.17
ATXN3-218ENST00000553309 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 A0A1W2PQH9 124 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 SHOXO15266 292 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 FKTNO75072 461 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 FARP2O94887 1054 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-218ENST00000553309 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
ATXN3-218ENST00000553309 ZPBP2Q6X784 338 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 SHDQ96IW2 340 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 G6PC3Q9BUM1 346 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 PRR13Q9NZ81 148 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 SLC12A7Q9Y666 1083 aa7.72□□□□□ -1.17
ATXN3-218ENST00000553309 C3P01024 1663 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 TMEM82A0PJX8 343 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-218ENST00000553309 ZNF648Q5T619 568 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-218ENST00000553309 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 LILRA2Q8N149 483 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 ANKS4BQ8N8V4 417 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 BRF1Q92994 677 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 DSCC1Q9BVC3 393 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 ZNF451Q9Y4E5 1061 aa7.71□□□□□ -1.18
ATXN3-218ENST00000553309 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.18
ATXN3-218ENST00000553309 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 VAV1P15498 845 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 CD247P20963 164 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 BMP8BP34820 402 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 CTSKP43235 329 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 ZNF445P59923 1031 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 CHRNEQ04844 493 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 NR0B2Q15466 257 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 TIGD5Q53EQ6 642 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
ATXN3-218ENST00000553309 GP6Q9HCN6 339 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
ATXN3-218ENST00000553309 ATP10AO60312 1499 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 GSNP06396 782 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms