RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 UROC1Q96N76 676 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 SLC7A5P2Q9GIP4 190 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 ABCG4Q9H172 646 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 EPB41L4AQ9HCS5 686 aaPredicted RBP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF304Q9HCX3 659 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 INCENPQ9NQS7 918 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 GPRC5DQ9NZD1 345 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 TBK1Q9UHD2 729 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 DDX41Q9UJV9 622 aaKnown RBP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 TPCN1Q9ULQ1 816 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 LUC7L2Q9Y383 392 aaKnown RBP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 ZFHX4Q86UP3 3567 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 ADGRB1O14514 1584 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 PTPRZ1P23471 2315 aaPredicted RBP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 AFDNP55196 1824 aaKnown RBP5.58□□□□□ -1.52
PFDN5-219ENST00000553171 SLX4Q8IY92 1834 aa5.58□□□□□ -1.52
PFDN5-219ENST00000553171 CARMIL3Q8ND23 1372 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 MAPK8IP3Q9UPT6 1336 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 TBKBP1A7MCY6 615 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 ZSCAN9O15535 394 aaPredicted RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 PRPF40AO75400 957 aaKnown RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 BAIAP3O94812 1187 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 FMNL1O95466 1100 aaPredicted RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 PDE4BQ07343 736 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 ARHGEF6Q15052 776 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 SLC9C1Q4G0N8 1177 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 INO80DQ53TQ3 878 aaPredicted RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 MUM1L1Q5H9M0 696 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 TSHZ3Q63HK5 1081 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 CEP135Q66GS9 1140 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 STYK1Q6J9G0 422 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 PPP4R4Q6NUP7 873 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 DLK2Q6UY11 383 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 MCM10Q7L590 875 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 DZIP1Q86YF9 867 aaKnown RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 FAM114A1Q8IWE2 563 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 SLC43A3Q8NBI5 491 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 ERMNQ8TAM6 284 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 NKX2-3Q8TAU0 364 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 GOLGA5Q8TBA6 731 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 MYLIPQ8WY64 445 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 JAKMIP2Q96AA8 810 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 FAM212AQ96EL1 285 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 SLC4A9Q96Q91 983 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 NAP1L3Q99457 506 aaPredicted RBP5.57□□□□□ -1.52
PFDN5-219ENST00000553171 BRIP1Q9BX63 1249 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 VPS33BQ9H267 617 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 RIC8AQ9NPQ8 531 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 TBC1D7Q9P0N9 293 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 ITGB1BP2Q9UKP3 347 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 MRC1P22897 1456 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 CD163L1Q9NR16 1453 aa5.57□□□□□ -1.52
PFDN5-219ENST00000553171 KDRP35968 1356 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 EVC2Q86UK5 1308 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 SMTNL1A8MU46 457 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 SMIM22K7EJ46 135 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 CLASP2O75122 1294 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 TBCAO75347 108 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 STAM2O75886 525 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 SNUPNO95149 360 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 BPNT1O95861 308 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 TPM1P09493 284 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 RFX1P22670 979 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 TPP2P29144 1249 aaPredicted RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 MCM5P33992 734 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 NF2P35240 595 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 UBASH3AP57075 661 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 GEMIN4P57678 1058 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 MRPL28Q13084 256 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 SYCP1Q15431 976 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 CLPPQ16740 277 aaPredicted RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 ALFQ53S48 1182 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 C10orf62Q5T681 223 aaPredicted RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 IRGCQ6NXR0 463 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF449Q6P9G9 518 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 NEK10Q6ZWH5 1172 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 SDCCAG8Q86SQ7 713 aaPredicted RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 RTKN2Q8IZC4 609 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF710Q8N1W2 664 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 USP38Q8NB14 1042 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 RNF214Q8ND24 703 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 FLCNQ8NFG4 579 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 GSDMBQ8TAX9 411 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 ANKRD49Q8WVL7 239 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 GLMNQ92990 594 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 PPCSQ9HAB8 311 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 TCF7L2Q9NQB0 619 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 INTUQ9ULD6 942 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 PCDHB8Q9UN66 801 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 MRPL42Q9Y6G3 142 aaKnown RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 BCORQ6W2J9 1755 aa5.56□□□□□ -1.52
PFDN5-219ENST00000553171 COL2A1P02458 1487 aaPredicted RBP5.56□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF609O15014 1411 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms