RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 GUCY2DQ02846 1103 aa12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 MICALCLQ6ZW33 695 aa12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 TAF4BQ92750 862 aa12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 CHD2O14647 1828 aaKnown RBP12.91□□□□□ -0.34
PPFIA2-227ENST00000552948 CDHR2Q9BYE9 1310 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 GUCY2CP25092 1073 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 INF2Q27J81 1249 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 LETM2Q2VYF4 491 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 TRIM58Q8NG06 486 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 HERVK_113P62684 666 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 B4GALNT4Q76KP1 1039 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 APTXQ7Z2E3 356 aaKnown RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 VIPAS39Q9H9C1 493 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 PDE2AO00408 941 aaPredicted RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 RASSF7Q02833 373 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 STAG1Q8WVM7 1258 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
PPFIA2-227ENST00000552948 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 E7EVH7 732 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 PSMD14O00487 310 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 KRT14P02533 472 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 SCG2P13521 617 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 GYG1P46976 350 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 NNTQ13423 1086 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 ELOA2Q8IYF1 753 aaPredicted RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC114Q96M63 670 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 EPB41L5Q9HCM4 733 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 REXO2Q9Y3B8 237 aaKnown RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 TMCO5BA8MYB1 307 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 RAD21O60216 631 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 NFU1Q9UMS0 254 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 EIF4A3P38919 411 aaKnown RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 PBX1P40424 430 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 IFT88Q13099 833 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 ARL8AQ96BM9 186 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 TSGA10Q9BZW7 698 aa12.89□□□□□ -0.35
PPFIA2-227ENST00000552948 CALM1P0DP23 149 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 CALM2P0DP24 149 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 CALM3P0DP25 149 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 KIF5BP33176 963 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 AMPD2Q01433 879 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 BICDL2A1A5D9 508 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 IL2RBP14784 551 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 ZBED6P86452 979 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 ALX1Q15699 326 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 LUC7LQ9NQ29 371 aaKnown RBP12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 RCCD1A6NED2 376 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 CALML3P27482 149 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 GUCY1A3Q02108 690 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 CAPN11Q9UMQ6 739 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 BLIDQ8IZY5 108 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
PPFIA2-227ENST00000552948 ABCC6O95255 1503 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 MYO1FO00160 1098 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 EPHB4P54760 987 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 PCDHA13Q9Y5I0 950 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 FTCDO95954 541 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms