RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ABHD17AQ96GS6 310 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 DRC1Q96MC2 740 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 TRERF1Q96PN7 1200 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 DNAJC2Q99543 621 aaKnown RBP6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 TRIM5Q9C035 493 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 STRN4Q9NRL3 753 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 PAG1Q9NWQ8 432 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 TAF6LQ9Y6J9 622 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ZNF609O15014 1411 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 A0A1W2PP55 124 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 CYP27B1O15528 508 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 DHX16O60231 1041 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 ZNF165P49910 485 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 STX1AQ16623 288 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 FAM173BQ6P4H8 233 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 LUZP1Q86V48 1076 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 CCAR1Q8IX12 1150 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 CKAP2LQ8IYA6 745 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 SPC24Q8NBT2 197 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 NSUN7Q8NE18 718 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 BHMTQ93088 406 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 EDC3Q96F86 508 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 TCEANC2Q96MN5 208 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 NEUROD6Q96NK8 337 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC94Q9BW85 323 aaPredicted RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 NAT10Q9H0A0 1025 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 ANO10Q9NW15 660 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 ZFATQ9P243 1243 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 GGT7Q9UJ14 662 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 AKAP2Q9Y2D5 859 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 PAXBP1Q9Y5B6 917 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 CPDO75976 1380 aa6.95□□□□□ -1.3
CHMP4A-210ENST00000552620 E7EWF7 191 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 GOLIM4O00461 696 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CTIFO43310 598 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 KINO60870 393 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 HSPD1P10809 573 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 XRCC5P13010 732 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CD33P20138 364 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 FGFR3P22607 806 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 PTGS1P23219 599 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 PDIA3P30101 505 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 FAM160A1Q05DH4 1040 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 TRIM28Q13263 835 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 IQCB1Q15051 598 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC158Q5M9N0 1113 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 FAM182BQ5T319 152 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 MEI1Q5TIA1 1274 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC186Q7Z3E2 898 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 SMAP1Q8IYB5 467 aaPredicted RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 ZNF654Q8IZM8 581 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 DDX11Q96FC9 970 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 SPACA7Q96KW9 195 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 PLA2G12BQ9BX93 195 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 ZFYVE1Q9HBF4 777 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 RTEL1Q9NZ71 1219 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 PYCARDQ9ULZ3 195 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 TTF2Q9UNY4 1162 aaKnown RBP6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 ABCC12Q96J65 1359 aa6.94□□□□□ -1.3
CHMP4A-210ENST00000552620 C5P01031 1676 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 ALS2Q96Q42 1657 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 DCCP43146 1447 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 COL18A1P39060 1754 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 MEGF6O75095 1541 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 SPEF2Q9C093 1822 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 BECN2A8MW95 431 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 TERTO14746 1132 aaKnown RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 WFS1O76024 890 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 KIF4AO95239 1232 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 CTDNEP1O95476 244 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 YEATS4O95619 227 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 TUBB4AP04350 444 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 TIMM10P62072 90 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 RBM6P78332 1123 aaKnown RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 NFX1Q12986 1120 aaKnown RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 ADALQ6DHV7 355 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 STOX1Q6ZVD7 989 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 ENGASEQ8NFI3 743 aa6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 ZCRB1Q8TBF4 217 aaKnown RBP6.93□□□□□ -1.3
CHMP4A-210ENST00000552620 JARID2Q92833 1246 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms