RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 ZHX2Q9Y6X8 837 aa12.54□□□□□ -0.4
LINC00661-206ENST00000552608 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
LINC00661-206ENST00000552608 NR5A1Q13285 461 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 MTMR2Q13614 643 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 CCDC84Q86UT8 332 aaPredicted RBP12.53□□□□□ -0.4
LINC00661-206ENST00000552608 LDHDQ86WU2 507 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 SLF1Q9BQI6 1058 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
LINC00661-206ENST00000552608 PTPRFP10586 1907 aa12.52□□□□□ -0.4
LINC00661-206ENST00000552608 TRIM75PA6NK02 468 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 SPTLC2O15270 562 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PPP6R2O75170 966 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 FKBP1BP68106 108 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PPATQ06203 517 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 VGLL4Q14135 290 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PIK3AP1Q6ZUJ8 805 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 REXO1Q8N1G1 1221 aaKnown RBP12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
LINC00661-206ENST00000552608 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 KIFC2Q96AC6 838 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 COA7Q96BR5 231 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.41
LINC00661-206ENST00000552608 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PCDHA6Q9UN73 950 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PCDHA8Q9Y5H6 950 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 PCDHA1Q9Y5I3 950 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 SNCAIPQ9Y6H5 919 aa12.52□□□□□ -0.41
LINC00661-206ENST00000552608 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
LINC00661-206ENST00000552608 TRPM7Q96QT4 1865 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 ZBED4O75132 1171 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 VCAM1P19320 739 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 ME1P48163 572 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC00661-206ENST00000552608 NPY5RQ15761 445 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 TTC38Q5R3I4 469 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 TNFRSF25Q93038 417 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 NAP1L4Q99733 375 aaKnown RBP12.51□□□□□ -0.41
LINC00661-206ENST00000552608 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
LINC00661-206ENST00000552608 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 FZD1Q9UP38 647 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 ABCB11O95342 1321 aa12.51□□□□□ -0.41
LINC00661-206ENST00000552608 FLOT1O75955 427 aa12.5□□□□□ -0.41
LINC00661-206ENST00000552608 HMGCS2P54868 508 aa12.5□□□□□ -0.41
LINC00661-206ENST00000552608 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
LINC00661-206ENST00000552608 MAP1SQ66K74 1059 aaPredicted RBP12.5□□□□□ -0.41
LINC00661-206ENST00000552608 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
LINC00661-206ENST00000552608 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
LINC00661-206ENST00000552608 MRPL11Q9Y3B7 192 aaKnown RBP12.5□□□□□ -0.41
LINC00661-206ENST00000552608 MORC2Q9Y6X9 1032 aaPredicted RBP12.5□□□□□ -0.41
LINC00661-206ENST00000552608 MYPNQ86TC9 1320 aa12.5□□□□□ -0.41
LINC00661-206ENST00000552608 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 M0R2N6 131 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 CXCL11O14625 94 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 GADD45BO75293 160 aaPredicted RBP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 PPIL2Q13356 520 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 AP3B2Q13367 1082 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 USH1GQ495M9 461 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 ADALQ6DHV7 355 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 CCDC73Q6ZRK6 1079 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
LINC00661-206ENST00000552608 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
LINC00661-206ENST00000552608 A0A1W2PQ27 194 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 A0A1W2PQ64 194 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 A0A1W2PQD8 194 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 CUTAO60888 179 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 LETM1O95202 739 aaPredicted RBP12.48□□□□□ -0.41
LINC00661-206ENST00000552608 FOSP01100 380 aaPredicted RBP12.48□□□□□ -0.41
LINC00661-206ENST00000552608 ICAM1P05362 532 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 TOB1P50616 345 aaPredicted RBP12.48□□□□□ -0.41
LINC00661-206ENST00000552608 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00661-206ENST00000552608 COG2Q14746 738 aa12.48□□□□□ -0.41
LINC00661-206ENST00000552608 JAKMIP3Q5VZ66 844 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms