RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 CXCL11O14625 94 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 MMP1P03956 469 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 TAL1P17542 331 aaPredicted RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 SNAPC2Q13487 334 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 FAM173BQ6P4H8 233 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 BARHL2Q9NY43 387 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 PCDHA1Q9Y5I3 950 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 A0A0G2JLL6 359 aaPredicted RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 BTBD18B2RXH4 712 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 STXBP3O00186 592 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 PRRT2Q7Z6L0 340 aaPredicted RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 DIS3L2Q8IYB7 885 aaKnown RBP10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
AC055716.2-201ENST00000552545 UNCXA6NJT0 531 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 ZBED4O75132 1171 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 KRT2P35908 639 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 IRX3P78415 501 aaPredicted RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 COG2Q14746 738 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 FASTKD5Q7L8L6 764 aaKnown RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 SAPCD2Q86UD0 394 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 CCDC12Q8WUD4 166 aaPredicted RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 AMNQ9BXJ7 453 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 COL11A1P12107 1806 aaPredicted RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PLA2G6O60733 806 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 GTF2A2P52657 109 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 NR5A1Q13285 461 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PLS1Q14651 629 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 MTMR8Q96EF0 704 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 C6orf50Q9HD87 102 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 SH3GLB2Q9NR46 395 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 ATP6V1DQ9Y5K8 247 aa10.03□□□□□ -0.8
AC055716.2-201ENST00000552545 PARP14Q460N5 1801 aa10.02□□□□□ -0.8
AC055716.2-201ENST00000552545 CCL15-CCL14A0A0B4J2E2 113 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 CETPP11597 493 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 CALML3P27482 149 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 RESTQ13127 1097 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 CCL15Q16663 113 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 RGMBQ6NW40 437 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 RASGRP4Q8TDF6 673 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 ZSCAN16Q9H4T2 348 aaPredicted RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 HOMER2Q9NSB8 354 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 VWA5AO00534 786 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 ADAMTS3O15072 1205 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 GNA11P29992 359 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 DSG3P32926 999 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 ADCY7P51828 1080 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 BLIDQ8IZY5 108 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 TFIP11Q9UBB9 837 aaKnown RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 PCDHA4Q9UN74 947 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 AGTPBP1Q9UPW5 1226 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 LOC285556D6RIA3 1793 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 MYH15Q9Y2K3 1946 aa10.02□□□□□ -0.81
AC055716.2-201ENST00000552545 hCG_1984214I3L0E3 225 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 ALAS1P13196 640 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 OSBPP22059 807 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 ZNF713Q8N859 430 aaPredicted RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 P2RX7Q99572 595 aaKnown RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 PAGR1Q9BTK6 254 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 PSTPIP2Q9H939 334 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 TLL2Q9Y6L7 1015 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 RLFQ13129 1914 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 PEX10O60683 326 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 BAG4O95429 457 aaKnown RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 ZBTB48P10074 688 aaPredicted RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 FSTL1Q12841 308 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 PABPC4Q13310 644 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms