RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
SNRPF-204ENST00000552085 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.22■□□□□ 0.03
SNRPF-204ENST00000552085 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
SNRPF-204ENST00000552085 DYNLL1P63167 89 aaKnown RBP15.21■□□□□ 0.03
SNRPF-204ENST00000552085 TFCP2Q12800 502 aa15.21■□□□□ 0.03
SNRPF-204ENST00000552085 ZNF467Q7Z7K2 595 aaPredicted RBP15.21■□□□□ 0.03
SNRPF-204ENST00000552085 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
SNRPF-204ENST00000552085 TET1Q8NFU7 2136 aa15.21■□□□□ 0.03
SNRPF-204ENST00000552085 MUTYHQ9UIF7 546 aa15.21■□□□□ 0.03
SNRPF-204ENST00000552085 ZFHX2Q9C0A1 2572 aaPredicted RBP15.2■□□□□ 0.02
SNRPF-204ENST00000552085 DNAJC25-GNG10A0A024R161 153 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 RFC2P35250 354 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 USP5P45974 858 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 SUGP1Q8IWZ8 645 aaKnown RBP15.2■□□□□ 0.02
SNRPF-204ENST00000552085 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 EDAQ92838 391 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 PBXIP1Q96AQ6 731 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 IRF2BPLQ9H1B7 796 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
SNRPF-204ENST00000552085 ASTN1O14525 1302 aa15.19■□□□□ 0.02
SNRPF-204ENST00000552085 CACNA1BQ00975 2339 aa15.19■□□□□ 0.02
SNRPF-204ENST00000552085 MPHOSPH10O00566 681 aaKnown RBP15.19■□□□□ 0.02
SNRPF-204ENST00000552085 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
SNRPF-204ENST00000552085 ERVK-21P61565 698 aa15.19■□□□□ 0.02
SNRPF-204ENST00000552085 ATOH1Q92858 354 aaPredicted RBP15.19■□□□□ 0.02
SNRPF-204ENST00000552085 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
SNRPF-204ENST00000552085 ZNF214Q9UL59 606 aaPredicted RBP15.19■□□□□ 0.02
SNRPF-204ENST00000552085 PTPRZ1P23471 2315 aaPredicted RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 PTPRCP08575 1304 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 TMEM221A6NGB7 291 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 M0R296 226 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 VWA5AO00534 786 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 WDR46O15213 610 aaKnown RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 KRT37O76014 449 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 BAIAP3O94812 1187 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 UBTFL1P0CB47 393 aaPredicted RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 CYP2C9P11712 490 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 ID4P47928 161 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 PSMC6P62333 389 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 TGS1Q96RS0 853 aaKnown RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.026e-9■□□□□ 9.7
SNRPF-204ENST00000552085 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 ALG13Q9NP73 1137 aaKnown RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
SNRPF-204ENST00000552085 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
SNRPF-204ENST00000552085 ZEB2O60315 1214 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 KCNA4P22459 653 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 KCNJ6P48051 423 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 PLCD1P51178 756 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 FSCN1Q16658 493 aaKnown RBP15.17■□□□□ 0.02
SNRPF-204ENST00000552085 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
SNRPF-204ENST00000552085 RNF135Q8IUD6 432 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 FBXO28Q9NVF7 368 aa15.17■□□□□ 0.02
SNRPF-204ENST00000552085 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TRIOO75962 3097 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
SNRPF-204ENST00000552085 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TNFAIP2Q03169 654 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TRIM67Q6ZTA4 783 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 ARMCX2Q7L311 632 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 ASCL5Q7RTU5 278 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TLK2Q86UE8 772 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 FBXL6Q8N531 539 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
SNRPF-204ENST00000552085 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 POP1Q99575 1024 aaKnown RBP15.16■□□□□ 0.02
SNRPF-204ENST00000552085 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 SH2D4AQ9H788 454 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 TNKSO95271 1327 aa15.16■□□□□ 0.02
SNRPF-204ENST00000552085 IGSF3O75054 1194 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 IQCF3P0C7M6 154 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 CYP7A1P22680 504 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 GABPAQ06546 454 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 TMEM179Q6ZVK1 233 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 TMCO2Q7Z6W1 182 aaPredicted RBP15.15■□□□□ 0.02
SNRPF-204ENST00000552085 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 SIAH1Q8IUQ4 282 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 PABPC5Q96DU9 382 aaKnown RBP15.15■□□□□ 0.02
SNRPF-204ENST00000552085 FGD4Q96M96 766 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 AP5M1Q9H0R1 490 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 PPP1R9AQ9ULJ8 1098 aa15.15■□□□□ 0.02
SNRPF-204ENST00000552085 GNEQ9Y223 722 aaKnown RBP15.15■□□□□ 0.02
SNRPF-204ENST00000552085 LINC01553A4QN01 128 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 WDR5P61964 334 aaKnown RBP15.14■□□□□ 0.01
SNRPF-204ENST00000552085 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 RETREG2Q8NC44 543 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
SNRPF-204ENST00000552085 TEX13BQ9BXU2 312 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms