RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ZNF365Q70YC5 407 aa25.89■■□□□ 1.74
SMARCD1-212ENST00000551966 ARMCX2Q7L311 632 aa25.89■■□□□ 1.74
SMARCD1-212ENST00000551966 FAM126BQ8IXS8 530 aa25.89■■□□□ 1.74
SMARCD1-212ENST00000551966 LRRCC1Q9C099 1032 aa25.89■■□□□ 1.74
SMARCD1-212ENST00000551966 A0A0U1RQG5 324 aaPredicted RBP25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 PRDM1O75626 825 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 NKX3-2P78367 333 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 CNTN2Q02246 1040 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 TJAP1Q5JTD0 557 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 CCDC144CPQ8IYA2 1237 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 MIER1Q8N108 512 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 CEP95Q96GE4 821 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 PPP1R12CQ9BZL4 782 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 EPB41L4AQ9HCS5 686 aaPredicted RBP25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 FEM1BQ9UK73 627 aa25.88■■□□□ 1.73
SMARCD1-212ENST00000551966 CD4P01730 458 aa25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 CHST13Q8NET6 341 aa25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 SPC25Q9HBM1 224 aa25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 MTMR4Q9NYA4 1195 aa25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 CTDP1Q9Y5B0 961 aaPredicted RBP25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 MCM3APO60318 1980 aa25.87■■□□□ 1.73
SMARCD1-212ENST00000551966 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 BEX3Q00994 111 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 ZNF444Q8N0Y2 327 aaPredicted RBP25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 TMEM199Q8N511 208 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 KBTBD3Q8NAB2 608 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 ECHDC1Q9NTX5 307 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 FBXO40Q9UH90 709 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 ASTN1O14525 1302 aa25.86■■□□□ 1.73
SMARCD1-212ENST00000551966 CYP2C18P33260 490 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 OAZ1P54368 228 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 CCDC129Q6ZRS4 1044 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 LRRC47Q8N1G4 583 aaKnown RBP25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 PPM1EQ8WY54 764 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 APPBP2Q92624 585 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 PRDM12Q9H4Q4 367 aa25.85■■□□□ 1.73
SMARCD1-212ENST00000551966 RNF113AO15541 343 aaKnown RBP25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 FAM133AQ8N9E0 248 aa25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 SLC43A3Q8NBI5 491 aa25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 GMCL1P1Q8NEA9 526 aa25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 CXXC1Q9P0U4 656 aaPredicted RBP25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 MYH4Q9Y623 1939 aa25.84■■□□□ 1.73
SMARCD1-212ENST00000551966 SOWAHBA6NEL2 793 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 GPAA1O43292 621 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 TTLL1O95922 423 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 PTGS1P23219 599 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 ADGRE1Q14246 886 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 SLFN13Q68D06 897 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 CCDC174Q6PII3 467 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 IL23AQ9NPF7 189 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 HOMER2Q9NSB8 354 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 SYNPO2Q9UMS6 1093 aa25.83■■□□□ 1.73
SMARCD1-212ENST00000551966 M0R2C6 588 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 TNFRSF10AO00220 468 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 TLR3O15455 904 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 BMP3P12645 472 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 TNFAIP2Q03169 654 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 HERVK_113Q902F9 699 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 AGBL1Q96MI9 1066 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 GAS2L1Q99501 681 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 GNEQ9Y223 722 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 DDX49Q9Y6V7 483 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 ZNF536O15090 1300 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 GRIN2DO15399 1336 aa25.82■■□□□ 1.72
SMARCD1-212ENST00000551966 TMEM232C9JQI7 657 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 AKNAD1Q5T1N1 836 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 TSHZ3Q63HK5 1081 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 PSRC1Q6PGN9 363 aaPredicted RBP25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 CXCL17Q6UXB2 119 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 IFNL3Q8IZI9 196 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 NEDD1Q8NHV4 660 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 CHMP4BQ9H444 224 aaKnown RBP25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 UMODL1Q5DID0 1318 aa25.81■■□□□ 1.72
SMARCD1-212ENST00000551966 PATL2C9JE40 543 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 APPP05067 770 aa25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 TDO2P48775 406 aa25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 C20orf194Q5TEA3 1177 aa25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 ACAD9Q9H845 621 aa25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 A1CFQ9NQ94 594 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-212ENST00000551966 FGBP02675 491 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 FDX1P10109 184 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 GNAT2P19087 354 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 TMEM63BQ5T3F8 832 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 ATXN2LQ8WWM7 1075 aaKnown RBP25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 CHMP4CQ96CF2 233 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 ZNF287Q9HBT7 754 aa25.79■■□□□ 1.72
SMARCD1-212ENST00000551966 SMPD1P17405 629 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 ITGA7Q13683 1181 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 CCDC85BQ15834 202 aaPredicted RBP25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 NOL8Q76FK4 1167 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 SEC62Q99442 399 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 NKX2-4Q9H2Z4 354 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 PDGFCQ9NRA1 345 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 RNF146Q9NTX7 359 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 MSRAQ9UJ68 235 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 YBX2Q9Y2T7 364 aaKnown RBP25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 TTC28Q96AY4 2481 aa25.78■■□□□ 1.72
SMARCD1-212ENST00000551966 ZFYP08048 801 aaPredicted RBP25.77■■□□□ 1.72
SMARCD1-212ENST00000551966 TFAP4Q01664 338 aa25.77■■□□□ 1.72
SMARCD1-212ENST00000551966 STAG1Q8WVM7 1258 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms