RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 TEX13BQ9BXU2 312 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 MROH8Q9H579 483 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 PTCH2Q9Y6C5 1203 aa17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
SMARCD1-211ENST00000551497 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 SLC25A27O95847 323 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 PTPREP23469 700 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 OAZ1P54368 228 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 MORN1Q5T089 497 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 CMTR1Q8N1G2 835 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 MAP3K14Q99558 947 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 AGXT2Q9BYV1 514 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
SMARCD1-211ENST00000551497 ZBTB43O43298 467 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 CYTH3O43739 400 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 CALM1P0DP23 149 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 CALM2P0DP24 149 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 CALM3P0DP25 149 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 PKN2Q16513 984 aaKnown RBP17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 FBXO46Q6PJ61 603 aaPredicted RBP17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 KIF2CQ99661 725 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 BACH2Q9BYV9 841 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
SMARCD1-211ENST00000551497 ICAM1P05362 532 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 ALAS1P13196 640 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 CYP2B6P20813 491 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 KIF5BP33176 963 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 PRMT2P55345 433 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 CDC37Q16543 378 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 USP6NLQ92738 828 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 ABHD8Q96I13 439 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 RIOX1Q9H6W3 641 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 FAM217BQ9NTX9 383 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 IVNS1ABPQ9Y6Y0 642 aa17.64■□□□□ 0.41
SMARCD1-211ENST00000551497 ZNFX1Q9P2E3 1918 aaKnown RBP17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 SLC15A5A6NIM6 579 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 STRNO43815 780 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 COBLO75128 1261 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 QRICH1Q2TAL8 776 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 RAET1EQ8TD07 263 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 PIGSQ96S52 555 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 PLXNB2O15031 1838 aa17.63■□□□□ 0.41
SMARCD1-211ENST00000551497 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 PGK2P07205 417 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 FCER1AP12319 257 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 ELNP15502 786 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 ADORA2AP29274 412 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 CDC27P30260 824 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 GNAQP50148 359 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 NEK4P51957 841 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 EVCP57679 992 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 GRB14Q14449 540 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 RTN1Q16799 776 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 MMP19Q99542 508 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
SMARCD1-211ENST00000551497 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 ADCY3O60266 1144 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 COPB2P35606 906 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 IRF5Q13568 498 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 CCL14Q16627 93 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 USH1GQ495M9 461 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 CHST13Q8NET6 341 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 ALDH8A1Q9H2A2 487 aaPredicted RBP17.61■□□□□ 0.41
SMARCD1-211ENST00000551497 hCG_1642624A0A1W2PR95 340 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 ZBTB5O15062 677 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 SMARCA1P28370 1054 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 RGS2P41220 211 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 AK2P54819 239 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 KCTD2Q14681 263 aa17.6■□□□□ 0.41
SMARCD1-211ENST00000551497 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms