RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-215ENST00000551391 ZNF655Q8N720 491 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-215ENST00000551391 ST13P5Q8NFI4 369 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-215ENST00000551391 ZNF669Q96BR6 464 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-215ENST00000551391 APBA2Q99767 749 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 LNPKQ9C0E8 428 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 KCNK12Q9HB15 430 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 ST7Q9NRC1 585 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 FBXL21Q9UKT6 434 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 ZNF451Q9Y4E5 1061 aa5.36□□□□□ -1.55
SCAF11-215ENST00000551391 RBAK-RBAKDNI3L0D1 243 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 ETV2O00321 342 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 NUAK1O60285 661 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 PPM1BO75688 479 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 EPHX1P07099 455 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 INHBBP09529 407 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 ITGA4P13612 1032 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 GLDCP23378 1020 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 HK2P52789 917 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 CTSWP56202 376 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 SNW1Q13573 536 aaKnown RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 RASGRF1Q13972 1273 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 MRM1Q6IN84 353 aaKnown RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 TMC3Q7Z5M5 1100 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 ZNF513Q8N8E2 541 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 PMFBP1Q8TBY8 1022 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 RCC1LQ96I51 464 aaKnown RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 HDAC8Q9BY41 377 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 GBP3Q9H0R5 595 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 OSBPL2Q9H1P3 480 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 CD320Q9NPF0 282 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 TMEM59LQ9UK28 342 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 SMG5Q9UPR3 1016 aaKnown RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 DIS3Q9Y2L1 958 aaKnown RBP5.35□□□□□ -1.55
SCAF11-215ENST00000551391 FHOD1Q9Y613 1164 aa5.35□□□□□ -1.55
SCAF11-215ENST00000551391 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 SHISA3A0PJX4 238 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 B2RBV5 119 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 PDPK1O15530 556 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 SUSD5O60279 629 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 MED14OSP0DP75 135 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 ZNF445P59923 1031 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 NFE2L2Q16236 605 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 CLEC16AQ2KHT3 1053 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 NOL9Q5SY16 702 aaKnown RBP5.34□□□□□ -1.55
SCAF11-215ENST00000551391 DPH6Q7L8W6 267 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 CREG2Q8IUH2 290 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 ARHGEF39Q8N4T4 335 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 CHST7Q9NS84 486 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 FAM86C1Q9NVL1 165 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 GFOD1Q9NXC2 390 aa5.34□□□□□ -1.55
SCAF11-215ENST00000551391 IGSF3O75054 1194 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 PRAMEF1O95521 474 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-215ENST00000551391 ERVFC1P60507 584 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 RASA3Q14644 834 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 CCDC144BQ3MJ40 725 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 RALGPS1Q5JS13 557 aa5.33□□□□□ -1.56
SCAF11-215ENST00000551391 SYTL4Q96C24 671 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-215ENST00000551391 HPXP02790 462 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 ESR1P03372 595 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 GSNP06396 782 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 BMP8BP34820 402 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 BUD31P41223 144 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-215ENST00000551391 LINC00310P59036 64 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 SLC10A6Q3KNW5 377 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 ADAT2Q7Z6V5 191 aaKnown RBP5.32□□□□□ -1.56
SCAF11-215ENST00000551391 USHBP1Q8N6Y0 703 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 LINC00116Q8NCU8 138 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 TCTN2Q96GX1 697 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 SGSM3Q96HU1 749 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 FGD4Q96M96 766 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 DEPDC7Q96QD5 511 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 ADAMTS10Q9H324 1103 aa5.32□□□□□ -1.56
SCAF11-215ENST00000551391 CDK11AQ9UQ88 783 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-215ENST00000551391 SF3B6Q9Y3B4 125 aaKnown RBP5.32□□□□□ -1.56
SCAF11-215ENST00000551391 WASH4PA8MWX3 477 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 CTSKP43235 329 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 GRB10Q13322 594 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 POMZP3Q6PJE2 187 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 CRACR2BQ8N4Y2 399 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-215ENST00000551391 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 OXR1Q8N573 874 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 BVESQ8NE79 360 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 BRF1Q92994 677 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
SCAF11-215ENST00000551391 DSCC1Q9BVC3 393 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 ZSWIM4Q9H7M6 989 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 SNTG2Q9NY99 539 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 APEX2Q9UBZ4 518 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 DUSP13Q9UII6 198 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 ZNF281Q9Y2X9 895 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 EMC9Q9Y3B6 208 aa5.31□□□□□ -1.56
SCAF11-215ENST00000551391 FAM221BA6H8Z2 402 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 IQCA1LA6NCM1 817 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 AGRPO00253 132 aa5.3□□□□□ -1.56
SCAF11-215ENST00000551391 NOP56O00567 594 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms