RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 ZNHIT6Q9NWK9 470 aaKnown RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 FRMD3A2A2Y4 597 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 E7EVH7 732 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
ERBB3-219ENST00000551242 PDE6AP16499 860 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 NR1D1P20393 614 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 PPP2R5AQ15172 486 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 CFAP58Q5T655 872 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 CCDC181Q5TID7 509 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 FANCBQ8NB91 859 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
ERBB3-219ENST00000551242 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 SPATS2Q86XZ4 545 aaKnown RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 IFNL3Q8IZI9 196 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 ANKRD13CQ8N6S4 541 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 FERMT2Q96AC1 680 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 MS4A14Q96JA4 679 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 PPANQ9NQ55 473 aaKnown RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 NLRP2Q9NX02 1062 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 H7C1D1 291 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 PRKAB2O43741 272 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 GTPBP6O43824 516 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 ZPR1O75312 459 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 GLI1P08151 1106 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 PAX7P23759 505 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 HPDP32754 393 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 DNA2P51530 1060 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 VAV2P52735 878 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 ZNF662Q6ZS27 426 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
ERBB3-219ENST00000551242 IQCKQ8N0W5 287 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 CAVIN3Q969G5 261 aa13.63□□□□□ -0.23
ERBB3-219ENST00000551242 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 A0A1W2PQC6 194 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 KRT2P35908 639 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 CDR1P51861 262 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 E2F5Q15329 346 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TRIM47Q96LD4 638 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 SCLT1Q96NL6 688 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
ERBB3-219ENST00000551242 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
ERBB3-219ENST00000551242 A6NNZ2 444 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
ERBB3-219ENST00000551242 BACH1O14867 736 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TACC1O75410 805 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TRADDQ15628 312 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 IL17AQ16552 155 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TUBB8Q3ZCM7 444 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 CCDC42Q96M95 316 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 ARMT1Q9H993 441 aa13.62□□□□□ -0.23
ERBB3-219ENST00000551242 PDS5AQ29RF7 1337 aaKnown RBP13.62□□□□□ -0.23
ERBB3-219ENST00000551242 ATP2C2O75185 946 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 MBD4O95243 580 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 MDH1P40925 334 aaKnown RBP13.61□□□□□ -0.23
ERBB3-219ENST00000551242 TBC1D8BQ0IIM8 1120 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 SPA17Q15506 151 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 PKN1Q16512 942 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 PIK3R5Q8WYR1 880 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 IFIH1Q9BYX4 1025 aaKnown RBP13.61□□□□□ -0.23
ERBB3-219ENST00000551242 MYH7P12883 1935 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 UBE3CQ15386 1083 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 CCDC170Q8IYT3 715 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 ADSSL1Q8N142 457 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 TUBGCP2Q9BSJ2 902 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 SLC24A3Q9HC58 644 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 EPB41L5Q9HCM4 733 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 ZNF330Q9Y3S2 320 aaPredicted RBP13.61□□□□□ -0.23
ERBB3-219ENST00000551242 V9GY48 417 aaPredicted RBP13.61□□□□□ -0.23
ERBB3-219ENST00000551242 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
ERBB3-219ENST00000551242 ERICH2A1L162 156 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 FAM107AO95990 144 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 SRGNP10124 158 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 MCM7P33993 719 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 DNM2P50570 870 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 GUCY2DQ02846 1103 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 WLSQ5T9L3 541 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 PAGR1Q9BTK6 254 aa13.6□□□□□ -0.23
ERBB3-219ENST00000551242 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms