RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
RAB3IP-212ENST00000550536 KCNK3O14649 394 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 ARMCX3Q9UH62 379 aaPredicted RBP13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 TRIM37O94972 964 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 DDAH1O94760 285 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 TMOD1P28289 359 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 RNF40O75150 1001 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 HADHQ16836 314 aaKnown RBP13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 CCDC38Q502W7 563 aa13.71□□□□□ -0.21
RAB3IP-212ENST00000550536 IFNB1P01574 187 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 KRT3P12035 628 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 PRKG1Q13976 671 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 NLRC4Q9NPP4 1024 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 OAS2P29728 719 aaKnown RBP13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 CLNS1AP54105 237 aaKnown RBP13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 WHAMMP3Q1A5X7 153 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 CTAGE3PQ8IX95 158 aa13.71□□□□□ -0.22
RAB3IP-212ENST00000550536 GSTA1P08263 222 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 GSTA2P09210 222 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 GUCY2FP51841 1108 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 CERKLQ49MI3 558 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 ZBTB38Q8NAP3 1195 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 RDH13Q8NBN7 331 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 GOLGA8CPA6NN73 597 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 OR52Z1P0C646 297 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 CSRNP1Q96S65 589 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 RUNDC3BQ96NL0 473 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 PFKFB1P16118 471 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 BRD3Q15059 726 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 NXNQ6DKJ4 435 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 TXNDC9O14530 226 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 DLATP10515 647 aaKnown RBP13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 HOMER3Q9NSC5 361 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 USP21Q9UK80 565 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
RAB3IP-212ENST00000550536 GABPB1Q06547 395 aaPredicted RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 RPN1P04843 607 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 ITKQ08881 620 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 RTEL1Q9NZ71 1219 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 PTPRTO14522 1441 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 RPS8P62241 208 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 MUM1Q2TAK8 710 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 PNMA8AQ86V59 439 aaPredicted RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 LAD1O00515 517 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 SCG2P13521 617 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 LMNB1P20700 586 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 GADL1Q6ZQY3 521 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 WDR46O15213 610 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 STK38LQ9Y2H1 464 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 RGS12O14924 1447 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 GTF2IP78347 998 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 SCYL1Q96KG9 808 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
RAB3IP-212ENST00000550536 PPFIA4O75335 1185 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 KIF22Q14807 665 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 PAGR1Q9BTK6 254 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 CCDC68Q9H2F9 335 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 INSRP06213 1382 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 TCHHQ07283 1943 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 A6NJR5 290 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 ABL1P00519 1130 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 RABGAP1Q9Y3P9 1069 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 ATP7BP35670 1465 aa13.68□□□□□ -0.22
RAB3IP-212ENST00000550536 PASKQ96RG2 1323 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms