RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 ZNF287Q9HBT7 754 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 FBXO40Q9UH90 709 aa20.47■□□□□ 0.87
HCFC2-205ENST00000550444 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 A0A0U1RQG5 324 aaPredicted RBP20.46■□□□□ 0.87
HCFC2-205ENST00000550444 GRXCR1A8MXD5 290 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 RNF113AO15541 343 aaKnown RBP20.46■□□□□ 0.87
HCFC2-205ENST00000550444 GPAA1O43292 621 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 ACRP10323 421 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 CSF2RAP15509 400 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 PBX2P40425 430 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 GJA9P57773 515 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 TMEM240Q5SV17 173 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 TSHZ3Q63HK5 1081 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 C16orf59Q7L2K0 433 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 TMEM199Q8N511 208 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 CHST13Q8NET6 341 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 FGD4Q96M96 766 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
HCFC2-205ENST00000550444 EYSQ5T1H1 3165 aa20.46■□□□□ 0.87
HCFC2-205ENST00000550444 TLR3O15455 904 aaKnown RBP20.45■□□□□ 0.86
HCFC2-205ENST00000550444 TTLL1O95922 423 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 BEX3Q00994 111 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 ZNF365Q70YC5 407 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 MKL1Q969V6 931 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
HCFC2-205ENST00000550444 PRDM6Q9NQX0 595 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 VCANP13611 3396 aa20.45■□□□□ 0.86
HCFC2-205ENST00000550444 CDH23Q9H251 3354 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 TMEM232C9JQI7 657 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 M0R2C6 588 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 BMP3P12645 472 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 GNAT2P19087 354 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 IKQ13123 557 aaPredicted RBP20.44■□□□□ 0.86
HCFC2-205ENST00000550444 GPATCH3Q96I76 525 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 GAS2L1Q99501 681 aaPredicted RBP20.44■□□□□ 0.86
HCFC2-205ENST00000550444 PBX4Q9BYU1 374 aa20.44■□□□□ 0.86
HCFC2-205ENST00000550444 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
HCFC2-205ENST00000550444 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 CYP2C18P33260 490 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 OAZ1P54368 228 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 TNFAIP2Q03169 654 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 FAM126BQ8IXS8 530 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 IFNL3Q8IZI9 196 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 GMCL1P1Q8NEA9 526 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 PRDM12Q9H4Q4 367 aa20.43■□□□□ 0.86
HCFC2-205ENST00000550444 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
HCFC2-205ENST00000550444 ZFYP08048 801 aaPredicted RBP20.42■□□□□ 0.86
HCFC2-205ENST00000550444 TJAP1Q5JTD0 557 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 C20orf194Q5TEA3 1177 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 CXCL17Q6UXB2 119 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.42■□□□□ 0.86
HCFC2-205ENST00000550444 AGBL1Q96MI9 1066 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 KATNBL1Q9H079 304 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
HCFC2-205ENST00000550444 CTAGE5O15320 804 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 STAT2P52630 851 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 TFAP4Q01664 338 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 PSRC1Q6PGN9 363 aaPredicted RBP20.41■□□□□ 0.86
HCFC2-205ENST00000550444 NEDD1Q8NHV4 660 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 NACAP1Q9BZK3 213 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 RNF146Q9NTX7 359 aa20.41■□□□□ 0.86
HCFC2-205ENST00000550444 SOWAHBA6NEL2 793 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 FDX1P10109 184 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 MYH7P12883 1935 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 PDE4BQ07343 736 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 RASIP1Q5U651 963 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 FAM133AQ8N9E0 248 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 CHURC1Q8WUH1 139 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 TRERF1Q96PN7 1200 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 GREB1LQ9C091 1923 aaPredicted RBP20.4■□□□□ 0.86
HCFC2-205ENST00000550444 AP5M1Q9H0R1 490 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 A1CFQ9NQ94 594 aaKnown RBP20.4■□□□□ 0.86
HCFC2-205ENST00000550444 MSRAQ9UJ68 235 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 SYNPO2Q9UMS6 1093 aa20.4■□□□□ 0.86
HCFC2-205ENST00000550444 DDX49Q9Y6V7 483 aaKnown RBP20.4■□□□□ 0.86
HCFC2-205ENST00000550444 ASB14A6NK59 587 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 DYNC1LI2O43237 492 aaPredicted RBP20.39■□□□□ 0.85
HCFC2-205ENST00000550444 CD4P01730 458 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 SLC3A2P08195 630 aaKnown RBP20.39■□□□□ 0.85
HCFC2-205ENST00000550444 ALAS1P13196 640 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 PTGS1P23219 599 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 MCCP23508 829 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 SLC1A4P43007 532 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 SNAP25P60880 206 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.85
HCFC2-205ENST00000550444 TLK2Q86UE8 772 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 FAM160B2Q86V87 743 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 IL23AQ9NPF7 189 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 PRUNE2Q8WUY3 3088 aa20.39■□□□□ 0.85
HCFC2-205ENST00000550444 ASTN1O14525 1302 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 FGBP02675 491 aa20.38■□□□□ 0.85
HCFC2-205ENST00000550444 IGFBP4P22692 258 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms