RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
PFDN5-208ENST00000549995 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
PFDN5-208ENST00000549995 APBA2Q99767 749 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 NUDT12Q9BQG2 462 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
PFDN5-208ENST00000549995 FBXO40Q9UH90 709 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 RIPK3Q9Y572 518 aa13.9□□□□□ -0.18
PFDN5-208ENST00000549995 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 SLC16A2P36021 539 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 RGS2P41220 211 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 RUFY3Q7L099 469 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 ABHD8Q96I13 439 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 ZNF333Q96JL9 665 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 JMJD4Q9H9V9 463 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
PFDN5-208ENST00000549995 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
PFDN5-208ENST00000549995 DIS3Q9Y2L1 958 aaKnown RBP13.89□□□□□ -0.19
PFDN5-208ENST00000549995 KLRF2D3W0D1 207 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 GHRHRQ02643 423 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 ADGRF4Q8IZF3 695 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 LRRC2Q9BYS8 371 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 IVNS1ABPQ9Y6Y0 642 aa13.88□□□□□ -0.19
PFDN5-208ENST00000549995 CENPFP49454 3210 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 CYTH3O43739 400 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 ADCY3O60266 1144 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
PFDN5-208ENST00000549995 ADORA2AP29274 412 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 GRK4P32298 578 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 KIF5BP33176 963 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 GNAQP50148 359 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
PFDN5-208ENST00000549995 PLS1Q14651 629 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
PFDN5-208ENST00000549995 OLFML2BQ68BL8 750 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 NCAPG2Q86XI2 1143 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 RAET1EQ8TD07 263 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 LZTS2Q9BRK4 669 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 ACAD9Q9H845 621 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
PFDN5-208ENST00000549995 COBLO75128 1261 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 HMGCRP04035 888 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 FCER1AP12319 257 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CPA1P15085 419 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 FUT2Q10981 343 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 TOB2Q14106 344 aaPredicted RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 SLC9C1Q4G0N8 1177 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 Q6ZUG5 572 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CCAR1Q8IX12 1150 aaKnown RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CPXCR1Q8N123 301 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 RGS22Q8NE09 1264 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 TRIB2Q92519 343 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 RNF146Q9NTX7 359 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 CYP46A1Q9Y6A2 500 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
PFDN5-208ENST00000549995 PFASO15067 1338 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 ABCB11O95342 1321 aa13.86□□□□□ -0.19
PFDN5-208ENST00000549995 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 ZBTB5O15062 677 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 KCTD2Q14681 263 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
PFDN5-208ENST00000549995 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 CCDC174Q6PII3 467 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-208ENST00000549995 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 NPLOC4Q8TAT6 608 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 CLEC4DQ8WXI8 215 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 FGD4Q96M96 766 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 TRERF1Q96PN7 1200 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 MMP19Q99542 508 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 A1CFQ9NQ94 594 aaKnown RBP13.85□□□□□ -0.19
PFDN5-208ENST00000549995 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-208ENST00000549995 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-208ENST00000549995 MCM3APO60318 1980 aa13.85□□□□□ -0.19
PFDN5-208ENST00000549995 KLF18A0A0U1RQI7 1052 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 ZBTB43O43298 467 aa13.84□□□□□ -0.19
PFDN5-208ENST00000549995 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms