RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CCDC174Q6PII3 467 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
TROAP-211ENST00000549891 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
TROAP-211ENST00000549891 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.16■□□□□ 0.18
TROAP-211ENST00000549891 PLIN4Q96Q06 1357 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.15■□□□□ 0.18
TROAP-211ENST00000549891 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.15■□□□□ 0.18
TROAP-211ENST00000549891 TIMP1P01033 207 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 FOSL2P15408 326 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 STAT2P52630 851 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 SLFN13Q68D06 897 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
TROAP-211ENST00000549891 NEDD1Q8NHV4 660 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 MYLIPQ8WY64 445 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 VTI1AQ96AJ9 217 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 CDH23Q9H251 3354 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
TROAP-211ENST00000549891 TTC41PQ6P2S7 1318 aa16.15■□□□□ 0.18
TROAP-211ENST00000549891 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
TROAP-211ENST00000549891 M0R2C6 588 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 TLR3O15455 904 aaKnown RBP16.14■□□□□ 0.17
TROAP-211ENST00000549891 ASGR1P07306 291 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 EPHB4P54760 987 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 GJA9P57773 515 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 GNASQ5JWF2 1037 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 TSHZ3Q63HK5 1081 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 NAPBQ9H115 298 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
TROAP-211ENST00000549891 ACAD9Q9H845 621 aa16.14■□□□□ 0.17
TROAP-211ENST00000549891 PRUNE2Q8WUY3 3088 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 IKQ13123 557 aaPredicted RBP16.13■□□□□ 0.17
TROAP-211ENST00000549891 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.175e-7■■■■□ 20.2
TROAP-211ENST00000549891 MFSD5Q6N075 450 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 TBX21Q9UL17 535 aa16.13■□□□□ 0.17
TROAP-211ENST00000549891 MYADML2A6NDP7 307 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 ASB14A6NK59 587 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 ARVCFO00192 962 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 DNAJB2P25686 324 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 SLC1A4P43007 532 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 CDK7P50613 346 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 TFAP4Q01664 338 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 PPARAQ07869 468 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 TMEM199Q8N511 208 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 FGD4Q96M96 766 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
TROAP-211ENST00000549891 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
TROAP-211ENST00000549891 RNF146Q9NTX7 359 aa16.11■□□□□ 0.17
TROAP-211ENST00000549891 VCANP13611 3396 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 ADCY6O43306 1168 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 PLA2G6O60733 806 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 CABYRO75952 493 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 NKX3-2P78367 333 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 CNTN2Q02246 1040 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 TNFAIP2Q03169 654 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 CCDC129Q6ZRS4 1044 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
TROAP-211ENST00000549891 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
TROAP-211ENST00000549891 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.1■□□□□ 0.177e-7■■■■□ 20.8
TROAP-211ENST00000549891 SEZ6LQ9BYH1 1024 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
TROAP-211ENST00000549891 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 ZEB2O60315 1214 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 MCCP23508 829 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 PSRC1Q6PGN9 363 aaPredicted RBP16.09■□□□□ 0.17
TROAP-211ENST00000549891 FAM126BQ8IXS8 530 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 PI4K2BQ8TCG2 481 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 TIFAQ96CG3 184 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 AGBL1Q96MI9 1066 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
TROAP-211ENST00000549891 KATNBL1Q9H079 304 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 ZNF576Q9H609 170 aa16.09■□□□□ 0.17
TROAP-211ENST00000549891 A1CFQ9NQ94 594 aaKnown RBP16.09■□□□□ 0.17
TROAP-211ENST00000549891 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.17
TROAP-211ENST00000549891 ALAS1P13196 640 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 CSF2RAP15509 400 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
TROAP-211ENST00000549891 GRIN2CQ14957 1233 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 TMEM240Q5SV17 173 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 MTIF3Q9H2K0 278 aaKnown RBP16.08■□□□□ 0.16
TROAP-211ENST00000549891 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
TROAP-211ENST00000549891 MYO9BQ13459 2157 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 ZNF536O15090 1300 aa16.08■□□□□ 0.16
TROAP-211ENST00000549891 MX1P20591 662 aa16.07■□□□□ 0.16
TROAP-211ENST00000549891 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
TROAP-211ENST00000549891 GAS2L1Q99501 681 aaPredicted RBP16.07■□□□□ 0.16
TROAP-211ENST00000549891 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms